Difference between revisions of "RXN-15122"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5471 RXN-5471] == * direction: ** LEFT-TO-RIGHT * common name: ** dolichyl-P-Glc:Glc1Man2GlcNAc...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase beta su...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5471 RXN-5471] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dolichyl-P-Glc:Glc1Man2GlcNAc2-PPdolichol α-1,3-glucosyltransferase
+
** Tryptophan synthase beta subunit-like PLP-dependent enzyme
−
* ec number:
+
** L-threonine ammonia-lyase
−
** [http://enzyme.expasy.org/EC/2.4.1.265 EC-2.4.1.265]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-166]][c] '''+''' 1 [[CPD-5169]][c] '''=>''' 1 [[CPD-5170]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DOLICHOLP]][c]
+
** 1 [[THR]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15056]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a dolichyl β-D-glucosyl phosphate[c] '''+''' 1 a glucosyl-(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''=>''' 1 a (glucosyl)2(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''+''' 1 H+[c] '''+''' 1 a dolichyl phosphate[c]
+
** 1 L-threonine[c] '''=>''' 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 (2Z)-2-aminobut-2-enoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-06_007490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-03_001910]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826]
 +
** '''4''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 24: Line 34:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31310 31310]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R06263 R06263]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=dolichyl-P-Glc:Glc1Man2GlcNAc2-PPdolichol α-1,3-glucosyltransferase}}
+
{{#set: common name=Tryptophan synthase beta subunit-like PLP-dependent enzyme}}
−
{{#set: ec number=EC-2.4.1.265}}
+
{{#set: common name=L-threonine ammonia-lyase}}
−
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
+
{{#set: gene associated=Ec-06_007490|Ec-03_001910}}
 +
{{#set: in pathway=ILEUSYN-PWY|PWY-5826|PWY-5437}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:37, 21 March 2018

Reaction RXN-15122

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tryptophan synthase beta subunit-like PLP-dependent enzyme
    • L-threonine ammonia-lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-threonine[c] => 1 H2O[c] + 1 H+[c] + 1 (2Z)-2-aminobut-2-enoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-5826, hypoglycin biosynthesis: PWY-5826
    • 4 reactions found over 14 reactions in the full pathway
  • PWY-5437, L-threonine degradation I: PWY-5437
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15122&oldid=28191"