Difference between revisions of "Ec-24 002140"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7677 RXN-7677] == * direction: ** LEFT-TO-RIGHT * common name: ** 71-hydroxychlorophyllide a mo...")
(Created page with "Category:Gene == Gene Ec-24_002140 == * left end position: ** 2479674 * transcription direction: ** POSITIVE * right end position: ** 2483269 * centisome position: ** 49.7...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7677 RXN-7677] ==
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== Gene Ec-24_002140 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2479674
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* common name:
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* transcription direction:
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** 71-hydroxychlorophyllide a monooxygenase
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** POSITIVE
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** chlorophyllide a oxygenase [overall]
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* right end position:
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** 2483269
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* centisome position:
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** 49.71606   
 
* Synonym(s):
 
* Synonym(s):
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** chlorophyllide a oxygenase
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** Esi_0060_0077
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** chlorophyll-b synthase
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** Esi0060_0077
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** CAO
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** CYP5164A1P
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-3661]]
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** 1 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-7015]][c] '''=>''' 1 [[CPD-7014]][c] '''+''' 1 [[NADP]][c] '''+''' 2 [[WATER]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[RXN-8038]]
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** 1 H+[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''+''' 1 71-hydroxychlorophyllide a[c] '''=>''' 1 chlorophyllide b[c] '''+''' 1 NADP+[c] '''+''' 2 H2O[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-8040]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN1F-147]]
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* Gene: [[Ec-28_000110]]
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** Source: [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* Reaction: [[RXN1F-148]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-14_003590]]
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* Reaction: [[RXN1F-150]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: GO-TERM
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* Reaction: [[RXN1F-151]]
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* Gene: [[Ec-11_003750]]
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** Source: [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* Reaction: [[UNSPECIFIC-MONOOXYGENASE-RXN]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-06_002880]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-06_002840]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-03_003240]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-06_002860]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5640]]
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* [[PWY-5946]]
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* [[PWY-5943]]
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* [[PWY-5947]]
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* [[PWY-7591]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=2479674}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08204 R08204]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2483269}}
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{{#set: common name=71-hydroxychlorophyllide a monooxygenase}}
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{{#set: centisome position=49.71606    }}
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{{#set: common name=chlorophyllide a oxygenase [overall]}}
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{{#set: common name=Esi_0060_0077|Esi0060_0077|CYP5164A1P}}
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{{#set: common name=chlorophyllide a oxygenase|chlorophyll-b synthase|CAO}}
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{{#set: reaction associated=RXN-3661|RXN-8038|RXN-8040|RXN1F-147|RXN1F-148|RXN1F-150|RXN1F-151|UNSPECIFIC-MONOOXYGENASE-RXN}}
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{{#set: gene associated=Ec-28_000110|Ec-14_003590|Ec-11_003750|Ec-06_002880|Ec-06_002840|Ec-03_003240|Ec-06_002860}}
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{{#set: pathway associated=PWY-5640|PWY-5946|PWY-5943|PWY-5947|PWY-7591}}
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{{#set: in pathway=PWY-5068}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:37, 21 March 2018

Gene Ec-24_002140

  • left end position:
    • 2479674
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2483269
  • centisome position:
    • 49.71606
  • Synonym(s):
    • Esi_0060_0077
    • Esi0060_0077
    • CYP5164A1P

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_002140&oldid=28233"