Difference between revisions of "Ec-12 008200"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINSYN-RXN ARGSUCCINSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** argininosucci...")
(Created page with "Category:Gene == Gene Ec-12_008200 == * left end position: ** 7338243 * transcription direction: ** POSITIVE * right end position: ** 7353862 * centisome position: ** 88.0...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINSYN-RXN ARGSUCCINSYN-RXN] ==
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== Gene Ec-12_008200 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 7338243
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* common name:
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* transcription direction:
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** argininosuccinate synthetase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.3.4.5 EC-6.3.4.5]
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** 7353862
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* centisome position:
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** 88.0302   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0130_0056
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** Esi0130_0056
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[FUCOKINASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[L-CITRULLINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[L-ARGININO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 L-aspartate[c] '''+''' 1 L-citrulline[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 L-arginino-succinate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-01_001870]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4983]], L-citrulline-nitric oxide cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=7338243}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7353862}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01954 R01954]
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{{#set: centisome position=88.0302    }}
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* UNIPROT:
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{{#set: common name=Esi_0130_0056|Esi0130_0056}}
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** [http://www.uniprot.org/uniprot/P22768 P22768]
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{{#set: reaction associated=FUCOKINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P0A6E4 P0A6E4]
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{{#set: pathway associated=PWY-6}}
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** [http://www.uniprot.org/uniprot/P00966 P00966]
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** [http://www.uniprot.org/uniprot/P16460 P16460]
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** [http://www.uniprot.org/uniprot/P13256 P13256]
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** [http://www.uniprot.org/uniprot/P13257 P13257]
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** [http://www.uniprot.org/uniprot/P09034 P09034]
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** [http://www.uniprot.org/uniprot/P24532 P24532]
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** [http://www.uniprot.org/uniprot/Q9PHK7 Q9PHK7]
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** [http://www.uniprot.org/uniprot/P57799 P57799]
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** [http://www.uniprot.org/uniprot/Q60174 Q60174]
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** [http://www.uniprot.org/uniprot/P44315 P44315]
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** [http://www.uniprot.org/uniprot/Q9JWM1 Q9JWM1]
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** [http://www.uniprot.org/uniprot/P50986 P50986]
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** [http://www.uniprot.org/uniprot/Q06734 Q06734]
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** [http://www.uniprot.org/uniprot/P0C1A1 P0C1A1]
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** [http://www.uniprot.org/uniprot/Q59491 Q59491]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=argininosuccinate synthetase}}
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{{#set: ec number=EC-6.3.4.5}}
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{{#set: gene associated=Ec-01_001870}}
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{{#set: in pathway=PWY-5154|ARGSYN-PWY|PWY-4984|ARGSYNBSUB-PWY|PWY-4983|PWY-7400}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:37, 21 March 2018

Gene Ec-12_008200

  • left end position:
    • 7338243
  • transcription direction:
    • POSITIVE
  • right end position:
    • 7353862
  • centisome position:
    • 88.0302
  • Synonym(s):
    • Esi_0130_0056
    • Esi0130_0056

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_008200&oldid=28282"