Difference between revisions of "Ec-06 004240"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15556 RXN-15556] == * direction: ** LEFT-TO-RIGHT * common name: ** Ubiquitin-conjugating enzym...")
(Created page with "Category:Gene == Gene Ec-06_004240 == * left end position: ** 3536082 * transcription direction: ** NEGATIVE * right end position: ** 3539535 * centisome position: ** 40.3...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15556 RXN-15556] ==
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== Gene Ec-06_004240 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3536082
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* common name:
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* transcription direction:
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** Ubiquitin-conjugating enzyme E2
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** NEGATIVE
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** Ubiquitin-activating enzyme e1, C-terminal
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* right end position:
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** Putative ubiquitin-conjugating enzyme E2
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** 3539535
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.2.23 EC-2.3.2.23]
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** 40.376568   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0062_0099
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** Esi0062_0099
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-12086]]
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** 1 [[S-ubiquitinyl-UAP-E1-L-cysteine]][c] '''+''' 1 [[Ubiquitin-carrier-protein-E2-L-cysteine]][c] '''=>''' 1 [[S-ubiquitinyl-UCP-E2-L-cysteine]][c] '''+''' 1 [[Ubiquitin-activating-protein-E1-L-cys]][c]
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* With common name(s):
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** 1 an S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine[c] '''+''' 1 an [E2 ubiquitin-conjugating enzyme]-L-cysteine[c] '''=>''' 1 an S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine[c] '''+''' 1 an [E1 ubiquitin-activating enzyme]-L-cysteine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-13_002970]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-14_005080]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-10_003200]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-08_003600]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-08_005090]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-28_000490]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-26_004480]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_005810]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-08_005320]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-09_003260]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-00_001460]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-09_004750]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-08_002220]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: go-term
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* Gene: [[Ec-16_005210]]
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* Reaction: [[RXN-12579]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: go-term
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== Pathways  ==
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* Reaction: [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* [[PWY-7511]], protein ubiquitylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[LIPAS-PWY]]
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* [[PWY-6857]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3536082}}
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{{#set: common name=Ubiquitin-conjugating enzyme E2}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Ubiquitin-activating enzyme e1, C-terminal}}
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{{#set: right end position=3539535}}
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{{#set: common name=Putative ubiquitin-conjugating enzyme E2}}
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{{#set: centisome position=40.376568    }}
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{{#set: ec number=EC-2.3.2.23}}
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{{#set: common name=Esi_0062_0099|Esi0062_0099}}
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{{#set: gene associated=Ec-13_002970|Ec-14_005080|Ec-10_003200|Ec-08_003600|Ec-08_005090|Ec-28_000490|Ec-26_004480|Ec-12_005810|Ec-08_005320|Ec-09_003260|Ec-00_001460|Ec-09_004750|Ec-08_002220|Ec-16_005210}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: in pathway=PWY-7511}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:38, 21 March 2018

Gene Ec-06_004240

  • left end position:
    • 3536082
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3539535
  • centisome position:
    • 40.376568
  • Synonym(s):
    • Esi_0062_0099
    • Esi0062_0099

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_004240&oldid=28355"