Difference between revisions of "Ec-11 003080"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTURIDYLYLTRANS-RXN GALACTURIDYLYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** Ur...")
(Created page with "Category:Gene == Gene Ec-11_003080 == * left end position: ** 3222076 * transcription direction: ** POSITIVE * right end position: ** 3236973 * centisome position: ** 51.2...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTURIDYLYLTRANS-RXN GALACTURIDYLYLTRANS-RXN] ==
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== Gene Ec-11_003080 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 3222076
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* common name:
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* transcription direction:
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** Uridyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.7.12 EC-2.7.7.12]
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** 3236973
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* centisome position:
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** 51.22816   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0048_0101
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** Esi0048_0101
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ISOCITDEH-RXN]]
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** 1 [[GALACTOSE-1P]][c] '''+''' 1 [[CPD-12575]][c] '''<=>''' 1 [[CPD-14553]][c] '''+''' 1 [[GLC-1-P]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 &alpha;-D-galactose 1-phosphate[c] '''+''' 1 UDP-&alpha;-D-glucose[c] '''<=>''' 1 UDP-&alpha;-D-galactose[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c]
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* Reaction: [[RXN-8642]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-00_010010]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: go-term
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== Pathways  ==
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* Reaction: [[RXN-9951]]
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* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-5913]]
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* [[REDCITCYC]]
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* [[PWY-7268]]
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* [[P23-PWY]]
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* [[P105-PWY]]
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* [[PWY-6969]]
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* [[FERMENTATION-PWY]]
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* [[PWY-6728]]
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* [[PWY-6549]]
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* [[PWY-7254]]
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* [[PWY-7124]]
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* [[TCA]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3222076}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13989 13989]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3236973}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00955 R00955]
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{{#set: centisome position=51.22816    }}
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* UNIPROT:
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{{#set: common name=Esi_0048_0101|Esi0048_0101}}
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** [http://www.uniprot.org/uniprot/P43424 P43424]
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{{#set: reaction associated=ISOCITDEH-RXN|RXN-8642|RXN-9951}}
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** [http://www.uniprot.org/uniprot/P31764 P31764]
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{{#set: pathway associated=PWY-5913|REDCITCYC|PWY-7268|P23-PWY|P105-PWY|PWY-6969|FERMENTATION-PWY|PWY-6728|PWY-6549|PWY-7254|PWY-7124|TCA}}
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** [http://www.uniprot.org/uniprot/P07902 P07902]
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** [http://www.uniprot.org/uniprot/P08431 P08431]
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** [http://www.uniprot.org/uniprot/P09148 P09148]
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** [http://www.uniprot.org/uniprot/P13212 P13212]
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** [http://www.uniprot.org/uniprot/P09580 P09580]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Uridyltransferase}}
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{{#set: ec number=EC-2.7.7.12}}
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{{#set: gene associated=Ec-00_010010}}
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{{#set: in pathway=PWY-6317|PWY66-422|PWY-6527}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:39, 21 March 2018

Gene Ec-11_003080

  • left end position:
    • 3222076
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3236973
  • centisome position:
    • 51.22816
  • Synonym(s):
    • Esi_0048_0101
    • Esi0048_0101

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_003080&oldid=28446"