Difference between revisions of "Ec-02 005910"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.10-RXN 6.3.4.10-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Biotin/lipoate A/B pr...")
(Created page with "Category:Gene == Gene Ec-02_005910 == * left end position: ** 6079457 * transcription direction: ** POSITIVE * right end position: ** 6088957 * centisome position: ** 93.1...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.10-RXN 6.3.4.10-RXN] ==
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== Gene Ec-02_005910 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6079457
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* common name:
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* transcription direction:
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** Biotin/lipoate A/B protein ligase
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** POSITIVE
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** Biotin/lipoate A/B protein ligase family
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* right end position:
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* ec number:
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** 6088957
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** [http://enzyme.expasy.org/EC/6.3.4.10 EC-6.3.4.10]
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* centisome position:
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** 93.13192   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0082_0071
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** Esi0082_0071
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[AMIDASE-RXN]]
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** 1 [[BIOTIN]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Apo-Propionyl-CoA-CO2-ligases]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Propionyl-CoA-CO2-ligases]][c] '''+''' 1 [[AMP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 biotin[c] '''+''' 1 ATP[c] '''+''' 1 apo-[propionyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''=>''' 1 diphosphate[c] '''+''' 1 [propionyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''+''' 1 AMP[c]
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* Reaction: [[GUANIDINOBUTANAMIDE-NH3-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[PYRAZIN-RXN]]
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* Gene: [[Ec-00_003530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[R311-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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* Gene: [[Ec-05_005190]]
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* Reaction: [[RXN-14727]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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* Gene: [[Ec-11_004970]]
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* Reaction: [[RXN-14728]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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* Gene: [[Ec-01_008620]]
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* Reaction: [[RXN-17608]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[RXNN-404]]
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-581]]
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* [[PWY-5025]]
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* [[PWY-3161]]
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* [[ARGDEG-V-PWY]]
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* [[PWY-7308]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=6079457}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04582 R04582]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6088957}}
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{{#set: common name=Biotin/lipoate A/B protein ligase}}
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{{#set: centisome position=93.13192    }}
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{{#set: common name=Biotin/lipoate A/B protein ligase family}}
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{{#set: common name=Esi_0082_0071|Esi0082_0071}}
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{{#set: ec number=EC-6.3.4.10}}
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{{#set: reaction associated=AMIDASE-RXN|GUANIDINOBUTANAMIDE-NH3-RXN|PYRAZIN-RXN|R311-RXN|RXN-14727|RXN-14728|RXN-17608|RXNN-404}}
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{{#set: gene associated=Ec-00_003530|Ec-05_005190|Ec-11_004970|Ec-01_008620}}
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{{#set: pathway associated=PWY-581|PWY-5025|PWY-3161|ARGDEG-V-PWY|PWY-7308}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:39, 21 March 2018

Gene Ec-02_005910

  • left end position:
    • 6079457
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6088957
  • centisome position:
    • 93.13192
  • Synonym(s):
    • Esi_0082_0071
    • Esi0082_0071

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-02_005910&oldid=28528"