Difference between revisions of "SUCCINATE--COA-LIGASE-GDP-FORMING-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10994 RXN-10994] == * direction: ** REVERSIBLE * common name: ** holo-[acyl-carrier-protein] sy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN SUCCINATE--COA-LIGASE-GDP-FORMING-RXN] == * direction: ** REV...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10994 RXN-10994] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN SUCCINATE--COA-LIGASE-GDP-FORMING-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** holo-[acyl-carrier-protein] synthase
+
** Succinate--CoA ligase (GDP-forming), alpha subunit
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.8.7 EC-2.7.8.7]
+
** [http://enzyme.expasy.org/EC/6.2.1.4 EC-6.2.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[VibB]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[holo-VibB]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[GTP]][c] '''<=>''' 1 [[Pi]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[SUC-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an apo-[VibB aryl-carrier protein][c] '''+''' 1 coenzyme A[c] '''<=>''' 1 adenosine 3',5'-bisphosphate[c] '''+''' 1 a holo-[VibB aryl-carrier protein][c] '''+''' 1 H+[c]
+
** 1 coenzyme A[c] '''+''' 1 succinate[c] '''+''' 1 GTP[c] '''<=>''' 1 phosphate[c] '''+''' 1 GDP[c] '''+''' 1 succinyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-06_004620]]
+
* Gene: [[Ec-10_000030]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-01_000130]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 29: Line 28:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22120 22120]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00432 R00432]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q03184 Q03184]
 +
** [http://www.uniprot.org/uniprot/O08371 O08371]
 +
** [http://www.uniprot.org/uniprot/O84829 O84829]
 +
** [http://www.uniprot.org/uniprot/Q8LAD2 Q8LAD2]
 +
** [http://www.uniprot.org/uniprot/P53587 P53587]
 +
** [http://www.uniprot.org/uniprot/P53312 P53312]
 +
** [http://www.uniprot.org/uniprot/P36967 P36967]
 +
** [http://www.uniprot.org/uniprot/P13086 P13086]
 +
** [http://www.uniprot.org/uniprot/Q9Y436 Q9Y436]
 +
** [http://www.uniprot.org/uniprot/P68209 P68209]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=holo-[acyl-carrier-protein] synthase}}
+
{{#set: common name=Succinate--CoA ligase (GDP-forming), alpha subunit}}
−
{{#set: ec number=EC-2.7.8.7}}
+
{{#set: ec number=EC-6.2.1.4}}
−
{{#set: gene associated=Ec-06_004620|Ec-01_000130}}
+
{{#set: gene associated=Ec-10_000030}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY66-398}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:41, 21 March 2018

Reaction SUCCINATE--COA-LIGASE-GDP-FORMING-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Succinate--CoA ligase (GDP-forming), alpha subunit
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 succinate[c] + 1 GTP[c] <=> 1 phosphate[c] + 1 GDP[c] + 1 succinyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-398, TCA cycle III (animals): PWY66-398
    • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN&oldid=28685"