Difference between revisions of "OROTPDECARB-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5462 RXN-5462] == * direction: ** LEFT-TO-RIGHT * common name: ** Alpha-(1,3)-mannosyltransfera...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROTPDECARB-RXN OROTPDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Aldolase-type T...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5462 RXN-5462] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROTPDECARB-RXN OROTPDECARB-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Alpha-(1,3)-mannosyltransferase, family GT4
+
** Aldolase-type TIM barrel
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.132 EC-2.4.1.132]
+
** [http://enzyme.expasy.org/EC/4.1.1.23 EC-4.1.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ALPHA-D-MANNOSYLCHITOBIO]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[CPD-5161]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c]
+
** 1 [[OROTIDINE-5-PHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a mannosyl-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''+''' 1 GDP-α-D-mannose[c] '''=>''' 1 a (mannosyl)2-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''+''' 1 H+[c] '''+''' 1 GDP[c]
+
** 1 orotidine 5'-phosphate[c] '''+''' 1 H+[c] '''=>''' 1 UMP[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-03_004420]]
+
* Gene: [[Ec-23_000110]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
* [[PWY-5686]], UMP biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
Line 29: Line 33:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29518 29518]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11596 11596]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05973 R05973]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00965 R00965]
−
** [http://www.genome.jp/dbget-bin/www_bget?R05002 R05002]
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P11172 P11172]
 +
** [http://www.uniprot.org/uniprot/Q9KQT7 Q9KQT7]
 +
** [http://www.uniprot.org/uniprot/Q9CFW9 Q9CFW9]
 +
** [http://www.uniprot.org/uniprot/P24220 P24220]
 +
** [http://www.uniprot.org/uniprot/P0A5M7 P0A5M7]
 +
** [http://www.uniprot.org/uniprot/P43812 P43812]
 +
** [http://www.uniprot.org/uniprot/Q9PIC1 Q9PIC1]
 +
** [http://www.uniprot.org/uniprot/P10652 P10652]
 +
** [http://www.uniprot.org/uniprot/P07817 P07817]
 +
** [http://www.uniprot.org/uniprot/P03962 P03962]
 +
** [http://www.uniprot.org/uniprot/P14017 P14017]
 +
** [http://www.uniprot.org/uniprot/P07691 P07691]
 +
** [http://www.uniprot.org/uniprot/P08244 P08244]
 +
** [http://www.uniprot.org/uniprot/P13439 P13439]
 +
** [http://www.uniprot.org/uniprot/P05035 P05035]
 +
** [http://www.uniprot.org/uniprot/P09463 P09463]
 +
** [http://www.uniprot.org/uniprot/P14964 P14964]
 +
** [http://www.uniprot.org/uniprot/P21593 P21593]
 +
** [http://www.uniprot.org/uniprot/P15188 P15188]
 +
** [http://www.uniprot.org/uniprot/P07922 P07922]
 +
** [http://www.uniprot.org/uniprot/P0A5M6 P0A5M6]
 +
** [http://www.uniprot.org/uniprot/Q9JV18 Q9JV18]
 +
** [http://www.uniprot.org/uniprot/P25971 P25971]
 +
** [http://www.uniprot.org/uniprot/P46535 P46535]
 +
** [http://www.uniprot.org/uniprot/P31754 P31754]
 +
** [http://www.uniprot.org/uniprot/P32430 P32430]
 +
** [http://www.uniprot.org/uniprot/Q01637 Q01637]
 +
** [http://www.uniprot.org/uniprot/P09556 P09556]
 +
** [http://www.uniprot.org/uniprot/P21594 P21594]
 +
** [http://www.uniprot.org/uniprot/Q06375 Q06375]
 +
** [http://www.uniprot.org/uniprot/P41769 P41769]
 +
** [http://www.uniprot.org/uniprot/Q18516 Q18516]
 +
** [http://www.uniprot.org/uniprot/Q59654 Q59654]
 +
** [http://www.uniprot.org/uniprot/Q42586 Q42586]
 +
** [http://www.uniprot.org/uniprot/P48844 P48844]
 +
** [http://www.uniprot.org/uniprot/P43230 P43230]
 +
** [http://www.uniprot.org/uniprot/Q42942 Q42942]
 +
** [http://www.uniprot.org/uniprot/O74110 O74110]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Alpha-(1,3)-mannosyltransferase, family GT4}}
+
{{#set: common name=Aldolase-type TIM barrel}}
−
{{#set: ec number=EC-2.4.1.132}}
+
{{#set: ec number=EC-4.1.1.23}}
−
{{#set: gene associated=Ec-03_004420}}
+
{{#set: gene associated=Ec-23_000110}}
−
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
+
{{#set: in pathway=PWY-5686}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:42, 21 March 2018

Reaction OROTPDECARB-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aldolase-type TIM barrel
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5686, UMP biosynthesis: PWY-5686
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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