Difference between revisions of "TRNA-URACIL-5--METHYLTRANSFERASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COUMARATE COUMARATE] == * smiles: ** C(=O)([O-])C=CC1(=CC=C(O)C=C1) * inchi key: ** InChIKey=NG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COUMARATE COUMARATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] ==
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* smiles:
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* direction:
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** C(=O)([O-])C=CC1(=CC=C(O)C=C1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=NGSWKAQJJWESNS-ZZXKWVIFSA-M
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* common name:
 
* common name:
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** 4-coumarate
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** S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase
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* molecular weight:
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* ec number:
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** 163.152   
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** [http://enzyme.expasy.org/EC/2.1.1.35 EC-2.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
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** 4-hydroxycinnamate
 
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** 4-hydroxycinnamic acid
 
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** p-coumarate
 
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** trans-4-hydroxycinnamate
 
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** p-coumaric acid
 
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** trans-p-hydroxycinnamate
 
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** trans-4-coumarate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Uracil-54-in-tRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[tRNA-containing-5Me-uridine54]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 a uracil54 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 a 5-methyluracil54 in tRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_000810]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 7400-08-0
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R00594 R00594]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=54708745 54708745]
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* UNIPROT:
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* HMDB : HMDB02035
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** [http://www.uniprot.org/uniprot/P23003 P23003]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P31812 P31812]
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** [http://www.genome.jp/dbget-bin/www_bget?C00811 C00811]
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** [http://www.uniprot.org/uniprot/Q9PP92 Q9PP92]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9JT82 Q9JT82]
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** [http://www.chemspider.com/Chemical-Structure.4450678.html 4450678]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: common name=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=12876 12876]
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{{#set: ec number=EC-2.1.1.35}}
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* METABOLIGHTS : MTBLC12876
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{{#set: gene associated=Ec-06_000810}}
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{{#set: smiles=C(=O)([O-])C=CC1(=CC=C(O)C=C1)}}
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{{#set: in pathway=}}
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{{#set: inchi key=InChIKey=NGSWKAQJJWESNS-ZZXKWVIFSA-M}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=4-coumarate}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: molecular weight=163.152    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=4-hydroxycinnamate|4-hydroxycinnamic acid|p-coumarate|trans-4-hydroxycinnamate|p-coumaric acid|trans-p-hydroxycinnamate|trans-4-coumarate}}
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{{#set: consumed by=4-COUMARATE--COA-LIGASE-RXN}}
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Latest revision as of 19:42, 21 March 2018

Reaction TRNA-URACIL-5--METHYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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