Difference between revisions of "RXN-17252"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=S-ubiquitinyl-UAP-E1-L-cysteine S-ubiquitinyl-UAP-E1-L-cysteine] == * common name: ** an S-ubiq...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17252 RXN-17252] == * direction: ** LEFT-TO-RIGHT * common name: ** Pheophorbide a oxygenase *...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17252 RXN-17252] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Pheophorbide a oxygenase |
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * [[ | + | ** 2 [[PROTON]][c] '''+''' 1 [[CPD-7061]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-18666]][c] |
| − | * [[ | + | * With common name(s): |
| − | == | + | ** 2 H+[c] '''+''' 1 pheophorbide a[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 oxygen[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H2O[c] '''+''' 1 epoxypheophorbide a[c] |
| − | * [[ | + | |
| − | == | + | == Genes associated with this reaction == |
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Ec-14_003590]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Ec-03_003240]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | == Pathways == | ||
| + | * [[PWY-5098]], chlorophyll a degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5098 PWY-5098] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-6927]], chlorophyll a degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6927 PWY-6927] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: common name= | + | {{#set: common name=Pheophorbide a oxygenase}} |
| − | {{#set: | + | {{#set: gene associated=Ec-14_003590|Ec-03_003240}} |
| − | {{#set: | + | {{#set: in pathway=PWY-5098|PWY-6927}} |
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:42, 21 March 2018
Contents
Reaction RXN-17252
- direction:
- LEFT-TO-RIGHT
- common name:
- Pheophorbide a oxygenase
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 PROTON[c] + 1 CPD-7061[c] + 2 Reduced-ferredoxins[c] + 1 OXYGEN-MOLECULE[c] => 2 Oxidized-ferredoxins[c] + 1 WATER[c] + 1 CPD-18666[c]
- With common name(s):
- 2 H+[c] + 1 pheophorbide a[c] + 2 a reduced ferredoxin [iron-sulfur] cluster[c] + 1 oxygen[c] => 2 an oxidized ferredoxin [iron-sulfur] cluster[c] + 1 H2O[c] + 1 epoxypheophorbide a[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-14_003590
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
- Gene: Ec-03_003240
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
Pathways
- PWY-5098, chlorophyll a degradation I: PWY-5098
- 3 reactions found over 6 reactions in the full pathway
- PWY-6927, chlorophyll a degradation II: PWY-6927
- 3 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
