Difference between revisions of "Ec-06 002460"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-470 RXN66-470] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-branched fatty acy...")
(Created page with "Category:Gene == Gene Ec-06_002460 == * left end position: ** 1789639 * transcription direction: ** POSITIVE * right end position: ** 1799033 * centisome position: ** 20.4...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-470 RXN66-470] ==
+
== Gene Ec-06_002460 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 1789639
−
* common name:
+
* transcription direction:
−
** 3-methyl-branched fatty acyl-CoA 2-hydroxylase
+
** POSITIVE
−
** Phytanoyl-CoA dioxygenase
+
* right end position:
−
* ec number:
+
** 1799033
−
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
+
* centisome position:
 +
** 20.4349   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0384_0020
 +
** Esi0384_0020
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN]]
−
** 1 [[3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-OH-3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[SUC]][c]
+
−
* With common name(s):
+
−
** 1 a 3-methyl-branched 2,3,4-saturated fatty acyl-CoA[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA[c] '''+''' 1 succinate[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Ec-23_003040]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Ec-22_003660]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Ec-01_011990]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Ec-01_001740]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: go-term
−
== Pathways  ==
+
* Reaction: [[RXN-15681]]
−
* [[PWY66-387]], fatty acid α-oxidation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-4041]]
 +
* [[PWY-7533]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=1789639}}
−
{{#set: common name=3-methyl-branched fatty acyl-CoA 2-hydroxylase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=Phytanoyl-CoA dioxygenase}}
+
{{#set: right end position=1799033}}
−
{{#set: ec number=EC-1.14.11}}
+
{{#set: centisome position=20.4349    }}
−
{{#set: gene associated=Ec-23_003040|Ec-22_003660|Ec-01_011990|Ec-01_001740}}
+
{{#set: common name=Esi_0384_0020|Esi0384_0020}}
−
{{#set: in pathway=PWY66-387}}
+
{{#set: reaction associated=GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN|RXN-15681}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: pathway associated=PWY-4041|PWY-7533}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:43, 21 March 2018

Gene Ec-06_002460

  • left end position:
    • 1789639
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1799033
  • centisome position:
    • 20.4349
  • Synonym(s):
    • Esi_0384_0020
    • Esi0384_0020

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_002460&oldid=28926"