Difference between revisions of "4.2.3.12-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10697 RXN-10697] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.3.12-RXN 4.2.3.12-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-pyruvoyl tetrahydro...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10697 RXN-10697] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.3.12-RXN 4.2.3.12-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ClpP/crotonase-like domain
+
** 6-pyruvoyl tetrahydropterin synthase/QueD family protein
−
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
+
−
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/4.2.3.12 EC-4.2.3.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-11518]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-11519]][c]
+
** 1 [[DIHYDRONEOPTERIN-P3]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[P3I]][c] '''+''' 1 [[6-PYRUVOYL-5678-TETRAHYDROPTERIN]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 OPC8-3-hydroxyacyl-CoA[c]
+
** 1 7,8-dihydroneopterin 3'-triphosphate[c] '''=>''' 1 H+[c] '''+''' 1 PPPi[c] '''+''' 1 6-pyruvoyl tetrahydropterin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-06_001380]]
+
* Gene: [[Ec-10_002190]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-16_003560]]
+
* Gene: [[Ec-27_003470]]
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-16_001250]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-14_006530]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
+
* [[PWY-5664]], tetrahydrobiopterin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5664 PWY-5664]
−
** '''10''' reactions found over '''19''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6983]], tetrahydrobiopterin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6983 PWY-6983]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7442 PWY-7442]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5663]], tetrahydrobiopterin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5663 PWY-5663]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 39: Line 37:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22048 22048]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04286 R04286]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ClpP/crotonase-like domain}}
+
{{#set: common name=6-pyruvoyl tetrahydropterin synthase/QueD family protein}}
−
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
+
{{#set: ec number=EC-4.2.3.12}}
−
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
+
{{#set: gene associated=Ec-10_002190|Ec-27_003470}}
−
{{#set: ec number=EC-4.2.1.17}}
+
{{#set: in pathway=PWY-5664|PWY-6983|PWY-7442|PWY-5663}}
−
{{#set: gene associated=Ec-06_001380|Ec-16_003560|Ec-16_001250|Ec-14_006530}}
+
−
{{#set: in pathway=PWY-735}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:43, 21 March 2018

Reaction 4.2.3.12-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-pyruvoyl tetrahydropterin synthase/QueD family protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5664, tetrahydrobiopterin biosynthesis II: PWY-5664
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6983, tetrahydrobiopterin biosynthesis III: PWY-6983
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7442, drosopterin and aurodrosopterin biosynthesis: PWY-7442
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5663, tetrahydrobiopterin biosynthesis I: PWY-5663
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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