Difference between revisions of "RXN-7911"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UBIQUITIN--PROTEIN-LIGASE-RXN UBIQUITIN--PROTEIN-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7911 RXN-7911] == * direction: ** REVERSIBLE * common name: ** NAD(P)-binding domain * ec numbe...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UBIQUITIN--PROTEIN-LIGASE-RXN UBIQUITIN--PROTEIN-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7911 RXN-7911] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** ubiquitin-protein transferase
+
** NAD(P)-binding domain
−
** Ubiquitin-activating enzyme e1, C-terminal
+
−
** putative ubiquitin activating enzyme
+
−
** Ubiquitin activating enzyme (E1) subunit UBA3
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.45 EC-6.2.1.45]
+
** [http://enzyme.expasy.org/EC/1.3.1.34 EC-1.3.1.34]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Ubiquitin-C-Terminal-Glycine]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Ubiquitin-activating-protein-E1-L-cys]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[S-ubiquitinyl-UAP-E1-L-cysteine]][c]
+
** 1 [[NADP]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TETRADEHYDROACYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [ubiquitin] C-terminal glycine[c] '''+''' 1 ATP[c] '''+''' 1 an [E1 ubiquitin-activating enzyme]-L-cysteine[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine[c]
+
** 1 NADP+[c] '''+''' 1 a trans-2-enoyl-CoA[c] '''<=>''' 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a trans-2,trans-4-dienoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-09_004750]]
+
* Gene: [[Ec-16_003950]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-13_002660]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-01_007490]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-26_001140]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-22_002200]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-01_008900]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-01_009550]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-06_002450]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-25_000510]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-25_002490]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-18_001830]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-01_001660]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-14_006720]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-25_000920]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-14_003730]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-00_007160]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-25_000910]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-09_000720]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-14_001990]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-25_002630]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-27_002840]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-01_010570]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-16_001360]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-24_003940]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Ec-12_000320]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7511]], protein ubiquitylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 104: Line 27:
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03876 R03876]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04319 R04319]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P22314 P22314]
+
{{#set: common name=NAD(P)-binding domain}}
−
** [http://www.uniprot.org/uniprot/P49459 P49459]
+
{{#set: ec number=EC-1.3.1.34}}
−
** [http://www.uniprot.org/uniprot/P62256 P62256]
+
{{#set: gene associated=Ec-16_003950}}
−
** [http://www.uniprot.org/uniprot/P63146 P63146]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P28263 P28263]
+
−
** [http://www.uniprot.org/uniprot/Q02053 Q02053]
+
−
** [http://www.uniprot.org/uniprot/P62257 P62257]
+
−
** [http://www.uniprot.org/uniprot/P61088 P61088]
+
−
** [http://www.uniprot.org/uniprot/P63279 P63279]
+
−
** [http://www.uniprot.org/uniprot/P19812 P19812]
+
−
** [http://www.uniprot.org/uniprot/P21734 P21734]
+
−
** [http://www.uniprot.org/uniprot/P25869 P25869]
+
−
** [http://www.uniprot.org/uniprot/P31254 P31254]
+
−
** [http://www.uniprot.org/uniprot/P15731 P15731]
+
−
** [http://www.uniprot.org/uniprot/P15732 P15732]
+
−
** [http://www.uniprot.org/uniprot/P29340 P29340]
+
−
** [http://www.uniprot.org/uniprot/P35133 P35133]
+
−
** [http://www.uniprot.org/uniprot/P35134 P35134]
+
−
** [http://www.uniprot.org/uniprot/P35132 P35132]
+
−
** [http://www.uniprot.org/uniprot/P33296 P33296]
+
−
** [http://www.uniprot.org/uniprot/P22515 P22515]
+
−
** [http://www.uniprot.org/uniprot/P39940 P39940]
+
−
** [http://www.uniprot.org/uniprot/P42748 P42748]
+
−
** [http://www.uniprot.org/uniprot/P42750 P42750]
+
−
** [http://www.uniprot.org/uniprot/P42749 P42749]
+
−
** [http://www.uniprot.org/uniprot/P42747 P42747]
+
−
** [http://www.uniprot.org/uniprot/P50623 P50623]
+
−
** [http://www.uniprot.org/uniprot/Q42973 Q42973]
+
−
** [http://www.uniprot.org/uniprot/P40984 P40984]
+
−
** [http://www.uniprot.org/uniprot/Q92462 Q92462]
+
−
** [http://www.uniprot.org/uniprot/Q42540 Q42540]
+
−
** [http://www.uniprot.org/uniprot/P93028 P93028]
+
−
** [http://www.uniprot.org/uniprot/P93393 P93393]
+
−
** [http://www.uniprot.org/uniprot/P31252 P31252]
+
−
** [http://www.uniprot.org/uniprot/P52486 P52486]
+
−
** [http://www.uniprot.org/uniprot/Q9YGM6 Q9YGM6]
+
−
** [http://www.uniprot.org/uniprot/O42646 O42646]
+
−
** [http://www.uniprot.org/uniprot/O15979 O15979]
+
−
** [http://www.uniprot.org/uniprot/P23566 P23566]
+
−
** [http://www.uniprot.org/uniprot/Q96PU5 Q96PU5]
+
−
** [http://www.uniprot.org/uniprot/P27949 P27949]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=ubiquitin-protein transferase}}
+
−
{{#set: common name=Ubiquitin-activating enzyme e1, C-terminal}}
+
−
{{#set: common name=putative ubiquitin activating enzyme}}
+
−
{{#set: common name=Ubiquitin activating enzyme (E1) subunit UBA3}}
+
−
{{#set: ec number=EC-6.2.1.45}}
+
−
{{#set: gene associated=Ec-09_004750|Ec-13_002660|Ec-01_007490|Ec-26_001140|Ec-22_002200|Ec-01_008900|Ec-01_009550|Ec-06_002450|Ec-25_000510|Ec-25_002490|Ec-18_001830|Ec-01_001660|Ec-14_006720|Ec-25_000920|Ec-14_003730|Ec-00_007160|Ec-25_000910|Ec-09_000720|Ec-14_001990|Ec-25_002630|Ec-27_002840|Ec-01_010570|Ec-16_001360|Ec-24_003940|Ec-12_000320}}
+
−
{{#set: in pathway=PWY-7511}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:44, 21 March 2018

Reaction RXN-7911

  • direction:
    • REVERSIBLE
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-7911&oldid=29093"