Difference between revisions of "RXN-11832"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-25 RXN3DJ-25] == * direction: ** LEFT-TO-RIGHT * common name: ** Sphingosine-1-phosphate pho...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11832 RXN-11832] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenylate kinase/UMP-CMP ki...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-25 RXN3DJ-25] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11832 RXN-11832] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Sphingosine-1-phosphate phosphatase
+
** Adenylate kinase/UMP-CMP kinase
 +
** cytidylate kinase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
 +
** [http://enzyme.expasy.org/EC/2.7.4.25 EC-2.7.4.25]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD3DJ-11366]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SPHINGOSINE]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[CMP]][c] '''=>''' 1 [[CDP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 sphingosine 1-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 sphingosine[c] '''+''' 1 phosphate[c]
+
** 1 ATP[c] '''+''' 1 CMP[c] '''=>''' 1 CDP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-00_007030]]
+
* Gene: [[Ec-14_004920]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-06_003080]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-07_003680]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-16_005090]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
+
* [[PWY-7205]], CMP phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
Line 27: Line 44:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27518 27518]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11600 11600]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06521 R06521]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00512 R00512]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O59845 O59845]
 +
** [http://www.uniprot.org/uniprot/Q29561 Q29561]
 +
** [http://www.uniprot.org/uniprot/P43892 P43892]
 +
** [http://www.uniprot.org/uniprot/Q58071 Q58071]
 +
** [http://www.uniprot.org/uniprot/Q9CEY1 Q9CEY1]
 +
** [http://www.uniprot.org/uniprot/P57064 P57064]
 +
** [http://www.uniprot.org/uniprot/P0A6I0 P0A6I0]
 +
** [http://www.uniprot.org/uniprot/P47572 P47572]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Sphingosine-1-phosphate phosphatase}}
+
{{#set: common name=Adenylate kinase/UMP-CMP kinase}}
−
{{#set: gene associated=Ec-00_007030}}
+
{{#set: common name=cytidylate kinase}}
−
{{#set: in pathway=PWY3DJ-11470}}
+
{{#set: ec number=EC-2.7.4.14}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: ec number=EC-2.7.4.25}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: gene associated=Ec-14_004920|Ec-06_003080|Ec-07_003680|Ec-16_005090}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: in pathway=PWY-7205}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:45, 21 March 2018

Reaction RXN-11832

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Adenylate kinase/UMP-CMP kinase
    • cytidylate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 CMP[c] => 1 CDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7205, CMP phosphorylation: PWY-7205
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-11832&oldid=29116"