Difference between revisions of "Ec-07 003070"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] == * direction: ** REVERSIBLE * common name: ** Pseudouridine-5'-phosphate gly...")
(Created page with "Category:Gene == Gene Ec-07_003070 == * left end position: ** 3260412 * transcription direction: ** NEGATIVE * right end position: ** 3263562 * centisome position: ** 42.2...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] ==
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== Gene Ec-07_003070 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 3260412
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* common name:
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* transcription direction:
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** Pseudouridine-5'-phosphate glycosidase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.2.1.70 EC-4.2.1.70]
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** 3263562
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* centisome position:
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** 42.220028   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0327_0019
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** Esi0327_0019
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[URACIL]][c] '''+''' 1 [[CPD-15317]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[PSEUDOURIDINE-5-P]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[ATPSYN-RXN]]
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** 1 uracil[c] '''+''' 1 D-ribofuranose 5-phosphate[c] '''<=>''' 1 H2O[c] '''+''' 1 pseudouridine 5'-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-04_005090]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6019]], pseudouridine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6019 PWY-6019]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7219]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3260412}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18337 18337]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3263562}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01055 R01055]
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{{#set: centisome position=42.220028    }}
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* UNIPROT:
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{{#set: common name=Esi_0327_0019|Esi0327_0019}}
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** [http://www.uniprot.org/uniprot/Q9JWF1 Q9JWF1]
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{{#set: reaction associated=ATPASE-RXN|ATPSYN-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JTX5 Q9JTX5]
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{{#set: pathway associated=PWY-7219}}
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** [http://www.uniprot.org/uniprot/Q9PPJ9 Q9PPJ9]
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** [http://www.uniprot.org/uniprot/Q9CGH0 Q9CGH0]
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** [http://www.uniprot.org/uniprot/Q9CI80 Q9CI80]
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** [http://www.uniprot.org/uniprot/Q9JX44 Q9JX44]
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** [http://www.uniprot.org/uniprot/Q9V1A5 Q9V1A5]
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** [http://www.uniprot.org/uniprot/Q9PP96 Q9PP96]
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** [http://www.uniprot.org/uniprot/Q9PN18 Q9PN18]
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** [http://www.uniprot.org/uniprot/Q9PJ89 Q9PJ89]
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** [http://www.uniprot.org/uniprot/Q9PNJ2 Q9PNJ2]
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** [http://www.uniprot.org/uniprot/Q9PLW9 Q9PLW9]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Pseudouridine-5'-phosphate glycosidase}}
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{{#set: ec number=EC-4.2.1.70}}
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{{#set: gene associated=Ec-04_005090}}
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{{#set: in pathway=PWY-6019}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:46, 21 March 2018

Gene Ec-07_003070

  • left end position:
    • 3260412
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3263562
  • centisome position:
    • 42.220028
  • Synonym(s):
    • Esi_0327_0019
    • Esi0327_0019

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_003070&oldid=29168"