Difference between revisions of "Ec-06 001090"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROG-RXN HYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** ferredoxin hydrogenase * ec...")
(Created page with "Category:Gene == Gene Ec-06_001090 == * left end position: ** 727586 * transcription direction: ** POSITIVE * right end position: ** 734509 * centisome position: ** 8.3079...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROG-RXN HYDROG-RXN] ==
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== Gene Ec-06_001090 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 727586
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* common name:
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* transcription direction:
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** ferredoxin hydrogenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.12.7.2 EC-1.12.7.2]
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** 734509
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* centisome position:
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** 8.307902   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0279_0022
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** Esi0279_0022
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** IPS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN]]
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** 1 [[HYDROGEN-MOLECULE]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''<=>''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c]
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* With common name(s):
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** 1 H2[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''<=>''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-24_003110]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-22_001020]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN66-579]]
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* [[PWY-6780]], hydrogen production VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6780 PWY-6780]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
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** '''2''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6785]], hydrogen production VIII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6785 PWY-6785]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6759]], hydrogen production III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6759 PWY-6759]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[GLUDEG-II-PWY]], L-glutamate degradation VII (to butanoate): [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-2301]]
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* [[PWY-4661]]
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* [[PWY-6580]]
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* [[PWY-6664]]
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* [[PWY1G-0]]
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* [[PWY-6372]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=727586}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00019 R00019]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=734509}}
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** [http://www.uniprot.org/uniprot/P27648 P27648]
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{{#set: centisome position=8.307902    }}
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** [http://www.uniprot.org/uniprot/P31892 P31892]
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{{#set: common name=Esi_0279_0022|Esi0279_0022|IPS}}
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** [http://www.uniprot.org/uniprot/O25350 O25350]
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{{#set: reaction associated=MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN|RXN66-579}}
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** [http://www.uniprot.org/uniprot/O67092 O67092]
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{{#set: pathway associated=PWY-2301|PWY-4661|PWY-6580|PWY-6664|PWY1G-0|PWY-6372}}
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** [http://www.uniprot.org/uniprot/P31891 P31891]
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** [http://www.uniprot.org/uniprot/P0AAJ8 P0AAJ8]
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** [http://www.uniprot.org/uniprot/O66894 O66894]
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** [http://www.uniprot.org/uniprot/P0AAM1 P0AAM1]
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** [http://www.uniprot.org/uniprot/P31898 P31898]
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** [http://www.uniprot.org/uniprot/P0ACE0 P0ACE0]
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** [http://www.uniprot.org/uniprot/O28891 O28891]
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** [http://www.uniprot.org/uniprot/O66895 O66895]
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** [http://www.uniprot.org/uniprot/Q9ZLK4 Q9ZLK4]
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** [http://www.uniprot.org/uniprot/Q9WY44 Q9WY44]
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** [http://www.uniprot.org/uniprot/Q46508 Q46508]
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** [http://www.uniprot.org/uniprot/O66896 O66896]
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** [http://www.uniprot.org/uniprot/O67095 O67095]
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** [http://www.uniprot.org/uniprot/Q9PN32 Q9PN32]
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** [http://www.uniprot.org/uniprot/P13061 P13061]
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** [http://www.uniprot.org/uniprot/Q9UYN3 Q9UYN3]
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** [http://www.uniprot.org/uniprot/P16429 P16429]
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** [http://www.uniprot.org/uniprot/O52683 O52683]
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** [http://www.uniprot.org/uniprot/P13066 P13066]
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** [http://www.uniprot.org/uniprot/O25349 O25349]
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** [http://www.uniprot.org/uniprot/P0AAK1 P0AAK1]
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** [http://www.uniprot.org/uniprot/P29166 P29166]
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** [http://www.uniprot.org/uniprot/P07603 P07603]
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** [http://www.uniprot.org/uniprot/P13628 P13628]
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** [http://www.uniprot.org/uniprot/P0ACD8 P0ACD8]
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** [http://www.uniprot.org/uniprot/P69739 P69739]
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** [http://www.uniprot.org/uniprot/P12636 P12636]
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** [http://www.uniprot.org/uniprot/P12635 P12635]
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** [http://www.uniprot.org/uniprot/Q59262 Q59262]
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** [http://www.uniprot.org/uniprot/P33375 P33375]
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** [http://www.uniprot.org/uniprot/P33374 P33374]
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** [http://www.uniprot.org/uniprot/P21950 P21950]
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** [http://www.uniprot.org/uniprot/P21949 P21949]
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** [http://www.uniprot.org/uniprot/P23000 P23000]
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** [http://www.uniprot.org/uniprot/Q7M121 Q7M121]
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** [http://www.uniprot.org/uniprot/P15283 P15283]
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** [http://www.uniprot.org/uniprot/P15284 P15284]
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** [http://www.uniprot.org/uniprot/P16430 P16430]
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** [http://www.uniprot.org/uniprot/P16431 P16431]
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** [http://www.uniprot.org/uniprot/P16432 P16432]
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** [http://www.uniprot.org/uniprot/P16433 P16433]
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** [http://www.uniprot.org/uniprot/P17633 P17633]
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** [http://www.uniprot.org/uniprot/P17632 P17632]
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** [http://www.uniprot.org/uniprot/P18191 P18191]
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** [http://www.uniprot.org/uniprot/P18637 P18637]
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** [http://www.uniprot.org/uniprot/P18636 P18636]
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** [http://www.uniprot.org/uniprot/Q46606 Q46606]
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** [http://www.uniprot.org/uniprot/P31875 P31875]
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** [http://www.uniprot.org/uniprot/Q7M0Y1 Q7M0Y1]
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** [http://www.uniprot.org/uniprot/Q7M0Y0 Q7M0Y0]
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** [http://www.uniprot.org/uniprot/Q9S8S0 Q9S8S0]
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** [http://www.uniprot.org/uniprot/P31883 P31883]
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** [http://www.uniprot.org/uniprot/P21960 P21960]
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** [http://www.uniprot.org/uniprot/Q43953 Q43953]
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** [http://www.uniprot.org/uniprot/O96948 O96948]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ferredoxin hydrogenase}}
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{{#set: ec number=EC-1.12.7.2}}
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{{#set: gene associated=Ec-24_003110|Ec-22_001020}}
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{{#set: in pathway=PWY-6780|PWY4LZ-257|PWY-6785|PWY-6759|GLUDEG-II-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:47, 21 March 2018

Gene Ec-06_001090

  • left end position:
    • 727586
  • transcription direction:
    • POSITIVE
  • right end position:
    • 734509
  • centisome position:
    • 8.307902
  • Synonym(s):
    • Esi_0279_0022
    • Esi0279_0022
    • IPS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_001090&oldid=29310"