Difference between revisions of "Ec-06 003440"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoribulokina...")
(Created page with "Category:Gene == Gene Ec-06_003440 == * left end position: ** 2824049 * transcription direction: ** POSITIVE * right end position: ** 2835426 * centisome position: ** 32.2...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] ==
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== Gene Ec-06_003440 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 2824049
* common name:
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* transcription direction:
** Phosphoribulokinase/uridine kinase
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** POSITIVE
* ec number:
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* right end position:
** [http://enzyme.expasy.org/EC/2.7.1.48 EC-2.7.1.48]
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** 2835426
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* centisome position:
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** 32.246254   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0064_0020
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** Esi0064_0020
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** MSDH
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[1.2.1.27-RXN]]
** 1 [[URIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
* With common name(s):
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*** Assignment: ec-number
** 1 uridine[c] '''+''' 1 ATP[c] '''=>''' 1 UMP[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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* Reaction: [[RXN-11213]]
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-26_002450]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
== Pathways  ==
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* Reaction: [[RXN-2902]]
* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7574]]
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* [[P562-PWY]]
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* [[BETA-ALA-DEGRADATION-I-PWY]]
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* [[PWY-1781]]
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* [[VALDEG-PWY]]
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* [[PWY-5642]]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: left end position=2824049}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16826 16826]
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{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
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{{#set: right end position=2835426}}
** [http://www.genome.jp/dbget-bin/www_bget?R00964 R00964]
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{{#set: centisome position=32.246254    }}
* UNIPROT:
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{{#set: common name=Esi_0064_0020|Esi0064_0020|MSDH}}
** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
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{{#set: reaction associated=1.2.1.27-RXN|RXN-11213|RXN-2902}}
** [http://www.uniprot.org/uniprot/P47622 P47622]
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{{#set: pathway associated=PWY-7574|P562-PWY|BETA-ALA-DEGRADATION-I-PWY|PWY-1781|VALDEG-PWY|PWY-5642}}
** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
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** [http://www.uniprot.org/uniprot/P44533 P44533]
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** [http://www.uniprot.org/uniprot/P27515 P27515]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Phosphoribulokinase/uridine kinase}}
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{{#set: ec number=EC-2.7.1.48}}
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{{#set: gene associated=Ec-26_002450}}
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{{#set: in pathway=PWY-7193}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:48, 21 March 2018

Gene Ec-06_003440

  • left end position:
    • 2824049
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2835426
  • centisome position:
    • 32.246254
  • Synonym(s):
    • Esi_0064_0020
    • Esi0064_0020
    • MSDH

Reactions associated

Pathways associated

External links