Difference between revisions of "Ec-24 004010"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
(Created page with "Category:Gene == Gene Ec-24_004010 == * left end position: ** 4458078 * transcription direction: ** NEGATIVE * right end position: ** 4463066 * centisome position: ** 89.3...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] ==
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== Gene Ec-24_004010 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4458078
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* transcription direction:
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** NEGATIVE
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* right end position:
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** 4463066
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* centisome position:
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** 89.38194   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0109_0058
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** Esi0109_0058
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** SR
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[5.1.1.16-RXN]]
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** 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[4-TRIMETHYLAMMONIOBUTANAL]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 3-hydroxy-N6,N6,N6-trimethyl-L-lysine[c] '''=>''' 1 glycine[c] '''+''' 1 4-trimethylammoniobutanal[c]
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* Reaction: [[RXN0-2381]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN0-2382]]
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* Gene: [[Ec-11_002460]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[TRYPSYN-RXN]]
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* [[PWY-6100]], L-carnitine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6100 PWY-6100]
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** Source: [[annotation-esiliculosus_genome]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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*** Assignment: automated-name-match
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== Reconstruction information  ==
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== Pathways associated ==
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* Category: [[orthology]]
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* [[TRPSYN-PWY]]
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** Source: [[orthology-aragem]]
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* [[PWY-6949]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=4458078}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03284 R03284]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4463066}}
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{{#set: gene associated=Ec-11_002460}}
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{{#set: centisome position=89.38194    }}
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{{#set: in pathway=PWY-6100}}
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{{#set: common name=Esi_0109_0058|Esi0109_0058|SR}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=5.1.1.16-RXN|RXN0-2381|RXN0-2382|TRYPSYN-RXN}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: pathway associated=TRPSYN-PWY|PWY-6949}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:48, 21 March 2018

Gene Ec-24_004010

  • left end position:
    • 4458078
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4463066
  • centisome position:
    • 89.38194
  • Synonym(s):
    • Esi_0109_0058
    • Esi0109_0058
    • SR

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_004010&oldid=29427"