Difference between revisions of "Ec-12 006850"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FOLYLPOLYGLUTAMATESYNTH-RXN FOLYLPOLYGLUTAMATESYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Ec-12_006850 == * left end position: ** 6198863 * transcription direction: ** NEGATIVE * right end position: ** 6204477 * centisome position: ** 74.3...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FOLYLPOLYGLUTAMATESYNTH-RXN FOLYLPOLYGLUTAMATESYNTH-RXN] ==
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== Gene Ec-12_006850 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6198863
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* common name:
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* transcription direction:
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** tetrahydrofolylpolyglutamate synthase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.3.2.17 EC-6.3.2.17]
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** 6204477
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* centisome position:
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** 74.36209   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0226_0036
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** Esi0226_0036
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.1.64-RXN]]
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** 1 [[THF-GLU-N]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[THF-GLU-N]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 a tetrahydrofolate[c] '''+''' 1 L-glutamate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 a tetrahydrofolate[c]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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* Gene: [[Ec-01_004980]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-10711]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-10767]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-12252]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: automated-name-match
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* Gene: [[Ec-07_002300]]
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* Reaction: [[RXN-12575]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[RXNQT-4366]]
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* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=6198863}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04241 R04241]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=6204477}}
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** [http://www.uniprot.org/uniprot/P15925 P15925]
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{{#set: centisome position=74.36209    }}
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** [http://www.uniprot.org/uniprot/Q9JVC6 Q9JVC6]
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{{#set: common name=Esi_0226_0036|Esi0226_0036}}
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** [http://www.uniprot.org/uniprot/P43775 P43775]
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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** [http://www.uniprot.org/uniprot/Q9PNK6 Q9PNK6]
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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** [http://www.uniprot.org/uniprot/Q9CGE0 Q9CGE0]
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** [http://www.uniprot.org/uniprot/Q50990 Q50990]
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** [http://www.uniprot.org/uniprot/P48760 P48760]
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** [http://www.uniprot.org/uniprot/P08192 P08192]
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** [http://www.uniprot.org/uniprot/O13492 O13492]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=tetrahydrofolylpolyglutamate synthase}}
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{{#set: ec number=EC-6.3.2.17}}
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{{#set: gene associated=Ec-01_004980|Ec-07_002300}}
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{{#set: in pathway=PWY-2161}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:48, 21 March 2018

Gene Ec-12_006850

  • left end position:
    • 6198863
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6204477
  • centisome position:
    • 74.36209
  • Synonym(s):
    • Esi_0226_0036
    • Esi0226_0036

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_006850&oldid=29437"