Difference between revisions of "Ec-19 000870"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11667 RXN-11667] == * direction: ** REVERSIBLE * common name: ** (S)-3-hydroxybutanoyl-CoA dehy...")
(Created page with "Category:Gene == Gene Ec-19_000870 == * left end position: ** 1033942 * transcription direction: ** POSITIVE * right end position: ** 1046800 * centisome position: ** 17.3...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11667 RXN-11667] ==
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== Gene Ec-19_000870 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 1033942
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* common name:
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* transcription direction:
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** (S)-3-hydroxybutanoyl-CoA dehydrogenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.2.1.150 EC-4.2.1.150]
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** 1046800
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* centisome position:
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** 17.316965   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0054_0013
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** Esi0054_0013
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACID-PHOSPHATASE-RXN]]
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** 1 [[S-3-HYDROXYBUTANOYL-COA]][c] '''<=>''' 1 [[CROTONYL-COA]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 (S)-3-hydroxybutanoyl-CoA[c] '''<=>''' 1 crotonyl-CoA[c] '''+''' 1 H2O[c]
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* Reaction: [[RXN-5822]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-17_000320]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-14_006530]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate): [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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* [[CENTFERM-PWY]], pyruvate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5177]], glutaryl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6883]], pyruvate fermentation to butanol II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[P3-PWY]], gallate degradation III (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P3-PWY P3-PWY]
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** '''1''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
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** '''4''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
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** '''6''' reactions found over '''16''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-6348]]
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* [[PWY-5083]]
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* [[NADPHOS-DEPHOS-PWY]]
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* [[NAD-BIOSYNTHESIS-II]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1033942}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26558 26558]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1046800}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03026 R03026]
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{{#set: centisome position=17.316965    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Esi_0054_0013|Esi0054_0013}}
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{{#set: common name=(S)-3-hydroxybutanoyl-CoA dehydrogenase}}
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{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
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{{#set: ec number=EC-4.2.1.150}}
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{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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{{#set: gene associated=Ec-17_000320|Ec-14_006530}}
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{{#set: in pathway=P162-PWY|CENTFERM-PWY|PWY-5177|PWY-6583|PWY-6883|P3-PWY|PWY-7401|PWY-6863|PWY-5789}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:49, 21 March 2018

Gene Ec-19_000870

  • left end position:
    • 1033942
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1046800
  • centisome position:
    • 17.316965
  • Synonym(s):
    • Esi_0054_0013
    • Esi0054_0013

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_000870&oldid=29607"