Difference between revisions of "METHENYLTHFCYCLOHYDRO-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** Phosphoglycera...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] == * direction: ** REVERSIBLE * common name: *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase
+
** Tetrahydrofolate dehydrogenase/cyclohydrolase
−
** D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
+
** Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
−
** Allosteric substrate binding domain
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.95 EC-1.1.1.95]
+
** [http://enzyme.expasy.org/EC/3.5.4.9 EC-3.5.4.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[G3P]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 3-phospho-D-glycerate[c] '''<=>''' 1 3-phospho-hydroxypyruvate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
+
** 1 H2O[c] '''+''' 1 a 5,10-methenyltetrahydrofolate[c] '''<=>''' 1 H+[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-17_000820]]
+
* Gene: [[Ec-14_004070]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-04_006300]]
+
* Gene: [[Ec-15_001370]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** Source: [[orthology-aragem]]
+
−
* Gene: [[Ec-11_000960]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
+
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5030]], L-histidine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5030 PWY-5030]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 +
** '''4''' reactions found over '''17''' reactions in the full pathway
 +
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
 +
** '''8''' reactions found over '''24''' reactions in the full pathway
 +
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 +
** '''12''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-6613]], tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6613 PWY-6613]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
Line 41: Line 49:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12641 12641]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23700 23700]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01655 R01655]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q58424 Q58424]
+
** [http://www.uniprot.org/uniprot/P09440 P09440]
−
** [http://www.uniprot.org/uniprot/P43885 P43885]
+
** [http://www.uniprot.org/uniprot/P07245 P07245]
−
** [http://www.uniprot.org/uniprot/P35136 P35136]
+
** [http://www.uniprot.org/uniprot/P11586 P11586]
−
** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
+
** [http://www.uniprot.org/uniprot/P18155 P18155]
−
** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
+
** [http://www.uniprot.org/uniprot/P44313 P44313]
−
** [http://www.uniprot.org/uniprot/P40510 P40510]
+
** [http://www.uniprot.org/uniprot/P47259 P47259]
−
** [http://www.uniprot.org/uniprot/P40054 P40054]
+
** [http://www.uniprot.org/uniprot/P13995 P13995]
−
** [http://www.uniprot.org/uniprot/O49485 O49485]
+
** [http://www.uniprot.org/uniprot/P54382 P54382]
−
** [http://www.uniprot.org/uniprot/P87228 P87228]
+
** [http://www.uniprot.org/uniprot/O67736 O67736]
−
** [http://www.uniprot.org/uniprot/O04130 O04130]
+
** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9]
 +
** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68]
 +
** [http://www.uniprot.org/uniprot/P24186 P24186]
 +
** [http://www.uniprot.org/uniprot/Q04448 Q04448]
 +
** [http://www.uniprot.org/uniprot/Q60006 Q60006]
 +
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
 +
** [http://www.uniprot.org/uniprot/P51696 P51696]
 +
** [http://www.uniprot.org/uniprot/O68031 O68031]
 +
** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0]
 +
** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase}}
+
{{#set: common name=Tetrahydrofolate dehydrogenase/cyclohydrolase}}
−
{{#set: common name=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain}}
+
{{#set: common name=Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain}}
−
{{#set: common name=Allosteric substrate binding domain}}
+
{{#set: ec number=EC-3.5.4.9}}
−
{{#set: ec number=EC-1.1.1.95}}
+
{{#set: gene associated=Ec-14_004070|Ec-15_001370}}
−
{{#set: gene associated=Ec-17_000820|Ec-04_006300|Ec-11_000960}}
+
{{#set: in pathway=PWY-1722|PWY-3841|1CMET2-PWY|PWY-5030|P164-PWY|CODH-PWY|PWY-5497|PWY-2201|PWY-6613}}
−
{{#set: in pathway=SERSYN-PWY}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:51, 21 March 2018

Reaction METHENYLTHFCYCLOHYDRO-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Tetrahydrofolate dehydrogenase/cyclohydrolase
    • Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate: PWY-1722
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3841, folate transformations II: PWY-3841
    • 10 reactions found over 11 reactions in the full pathway
  • 1CMET2-PWY, N10-formyl-tetrahydrofolate biosynthesis: 1CMET2-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5030, L-histidine degradation III: PWY-5030
    • 2 reactions found over 6 reactions in the full pathway
  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 4 reactions found over 17 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
    • 8 reactions found over 24 reactions in the full pathway
  • PWY-2201, folate transformations I: PWY-2201
    • 12 reactions found over 12 reactions in the full pathway
  • PWY-6613, tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: PWY-6613
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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