Difference between revisions of "CPD-7117"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] == * direction: ** REVERSIBLE * common name: *...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7117 CPD-7117] == * smiles: ** C(O)C1(C(O)C(O)C(O)C(O1)OC3(C(C2(C=C(O)C(O)=C(O)C=2))=[O+]C4...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7117 CPD-7117] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C(O)C1(C(O)C(O)C(O)C(O1)OC3(C(C2(C=C(O)C(O)=C(O)C=2))=[O+]C4(C(C=3)=C([O-])C=C([O-])C=4)))
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* inchi key:
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** InChIKey=XENHPQQLDPAYIJ-PEVLUNPASA-M
 
* common name:
 
* common name:
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** Tetrahydrofolate dehydrogenase/cyclohydrolase
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** delphinidin-3-O-β-D-glucoside
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** Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
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* molecular weight:
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* ec number:
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** 463.374   
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** [http://enzyme.expasy.org/EC/3.5.4.9 EC-3.5.4.9]
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* Synonym(s):
 
* Synonym(s):
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** delfinidin-3-O-glucoside
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-8228]]
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** 1 [[WATER]][c] '''+''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 a 5,10-methenyltetrahydrofolate[c] '''<=>''' 1 H+[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-14_004070]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-15_001370]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5030]], L-histidine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5030 PWY-5030]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
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** '''4''' reactions found over '''17''' reactions in the full pathway
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* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
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** '''8''' reactions found over '''24''' reactions in the full pathway
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* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
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** '''12''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-6613]], tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6613 PWY-6613]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* LIPID_MAPS : LMPK12010278
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23700 23700]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=165559 165559]
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** [http://www.genome.jp/dbget-bin/www_bget?R01655 R01655]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=31463 31463]
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** [http://www.uniprot.org/uniprot/P09440 P09440]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P07245 P07245]
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** [http://www.genome.jp/dbget-bin/www_bget?C12138 C12138]
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** [http://www.uniprot.org/uniprot/P11586 P11586]
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* HMDB : HMDB37997
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** [http://www.uniprot.org/uniprot/P18155 P18155]
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{{#set: smiles=C(O)C1(C(O)C(O)C(O)C(O1)OC3(C(C2(C=C(O)C(O)=C(O)C=2))=[O+]C4(C(C=3)=C([O-])C=C([O-])C=4)))}}
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** [http://www.uniprot.org/uniprot/P44313 P44313]
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{{#set: inchi key=InChIKey=XENHPQQLDPAYIJ-PEVLUNPASA-M}}
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** [http://www.uniprot.org/uniprot/P47259 P47259]
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{{#set: common name=delphinidin-3-O-&beta;-D-glucoside}}
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** [http://www.uniprot.org/uniprot/P13995 P13995]
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{{#set: molecular weight=463.374    }}
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** [http://www.uniprot.org/uniprot/P54382 P54382]
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{{#set: common name=delfinidin-3-O-glucoside}}
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** [http://www.uniprot.org/uniprot/O67736 O67736]
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{{#set: consumed by=RXN-8228}}
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** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9]
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** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68]
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** [http://www.uniprot.org/uniprot/P24186 P24186]
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** [http://www.uniprot.org/uniprot/Q04448 Q04448]
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** [http://www.uniprot.org/uniprot/Q60006 Q60006]
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** [http://www.uniprot.org/uniprot/Q27772 Q27772]
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** [http://www.uniprot.org/uniprot/P51696 P51696]
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** [http://www.uniprot.org/uniprot/O68031 O68031]
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** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0]
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** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Tetrahydrofolate dehydrogenase/cyclohydrolase}}
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{{#set: common name=Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain}}
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{{#set: ec number=EC-3.5.4.9}}
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{{#set: gene associated=Ec-14_004070|Ec-15_001370}}
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{{#set: in pathway=PWY-1722|PWY-3841|1CMET2-PWY|PWY-5030|P164-PWY|CODH-PWY|PWY-5497|PWY-2201|PWY-6613}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:52, 21 March 2018

Metabolite CPD-7117

  • smiles:
    • C(O)C1(C(O)C(O)C(O)C(O1)OC3(C(C2(C=C(O)C(O)=C(O)C=2))=[O+]C4(C(C=3)=C([O-])C=C([O-])C=4)))
  • inchi key:
    • InChIKey=XENHPQQLDPAYIJ-PEVLUNPASA-M
  • common name:
    • delphinidin-3-O-β-D-glucoside
  • molecular weight:
    • 463.374
  • Synonym(s):
    • delfinidin-3-O-glucoside

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • LIPID_MAPS : LMPK12010278
  • PUBCHEM:
  • CHEBI:
  • LIGAND-CPD:
  • HMDB : HMDB37997
"C(O)C1(C(O)C(O)C(O)C(O1)OC3(C(C2(C=C(O)C(O)=C(O)C=2))=[O+]C4(C(C=3)=C([O-])C=C([O-])C=4)))" cannot be used as a page name in this wiki.



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