Difference between revisions of "RXN-14272"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17473 RXN-17473] == * direction: ** REVERSIBLE * common name: ** biotin synthase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14272 RXN-14272] == * direction: ** LEFT-TO-RIGHT * common name: ** (E)-hexadec-2-enoyl-CoA hyd...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17473 RXN-17473] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14272 RXN-14272] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** biotin synthase
+
** (E)-hexadec-2-enoyl-CoA hydratase
 +
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
 +
** ClpP/crotonase-like domain
 +
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-5662]][c] '''<=>''' 1 [[MET]][c] '''+''' 1 [[BIOTIN]][c] '''+''' 1 [[CH33ADO]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CPD0-2117]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2232]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 9-mercaptodethiobiotin[c] '''<=>''' 1 L-methionine[c] '''+''' 1 biotin[c] '''+''' 1 5'-deoxyadenosine[c] '''+''' 1 H+[c]
+
** 1 trans-hexadec-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxyhexadecanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-24_000980]]
+
* Gene: [[Ec-16_003560]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-16_001250]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-06_001380]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-14_006530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
 +
** '''5''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
 +
** '''4''' reactions found over '''22''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 24: Line 42:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=biotin synthase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31165 31165]
−
{{#set: gene associated=Ec-24_000980}}
+
* LIGAND-RXN:
−
{{#set: in pathway=}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04738 R04738]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=(E)-hexadec-2-enoyl-CoA hydratase}}
 +
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
 +
{{#set: common name=ClpP/crotonase-like domain}}
 +
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
 +
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: gene associated=Ec-16_003560|Ec-16_001250|Ec-06_001380|Ec-14_006530}}
 +
{{#set: in pathway=PWY-7654|PWY-7656}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:52, 21 March 2018

Reaction RXN-14272

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • (E)-hexadec-2-enoyl-CoA hydratase
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • ClpP/crotonase-like domain
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 trans-hexadec-2-enoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxyhexadecanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
    • 5 reactions found over 11 reactions in the full pathway
  • PWY-7656, Spodoptera littoralis pheromone biosynthesis: PWY-7656
    • 4 reactions found over 22 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14272&oldid=29905"