Difference between revisions of "RXN-16082"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URATE-OXIDASE-RXN URATE-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** urate oxida...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16082 RXN-16082] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URATE-OXIDASE-RXN URATE-OXIDASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16082 RXN-16082] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** urate oxidase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.7.3.3 EC-1.7.3.3]
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[URATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[5-HYDROXYISOURATE]][c]
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** 1 [[MALONYL-COA]][c] '''+''' 1 [[CPD-14426]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-17332]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
** 1 urate[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 5-hydroxyisourate[c]
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** 1 malonyl-CoA[c] '''+''' 1 docosapentaenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 3-oxo-tetracosapentaenoyl-CoA[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* Gene: [[Ec-06_002470]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: GO-TERM
 
** Source: [[orthology-aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5691]], urate degradation to allantoin I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5691 PWY-5691]
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
** '''3''' reactions found over '''3''' reactions in the full pathway
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** '''14''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21368 21368]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02106 R02106]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P04670 P04670]
 
** [http://www.uniprot.org/uniprot/P16163 P16163]
 
** [http://www.uniprot.org/uniprot/Q00511 Q00511]
 
** [http://www.uniprot.org/uniprot/P33282 P33282]
 
** [http://www.uniprot.org/uniprot/P25688 P25688]
 
** [http://www.uniprot.org/uniprot/P16164 P16164]
 
** [http://www.uniprot.org/uniprot/Q45697 Q45697]
 
** [http://www.uniprot.org/uniprot/P78609 P78609]
 
** [http://www.uniprot.org/uniprot/P09118 P09118]
 
** [http://www.uniprot.org/uniprot/P11645 P11645]
 
** [http://www.uniprot.org/uniprot/P23194 P23194]
 
** [http://www.uniprot.org/uniprot/P34799 P34799]
 
** [http://www.uniprot.org/uniprot/P34798 P34798]
 
** [http://www.uniprot.org/uniprot/P53763 P53763]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=urate oxidase}}
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{{#set: ec number=EC-2.3.1}}
{{#set: ec number=EC-1.7.3.3}}
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{{#set: in pathway=PWY-7606}}
{{#set: gene associated=Ec-06_002470}}
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{{#set: reconstruction category=annotation}}
{{#set: in pathway=PWY-5691}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:56, 21 March 2018

Reaction RXN-16082

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links