Difference between revisions of "RXN0-2044"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMETB12-RXN HOMOCYSMETB12-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Methionine...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] == * direction: ** REVERSIBLE * common name: ** 6-phosphogluconate dehydrogena...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMETB12-RXN HOMOCYSMETB12-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Methionine synthase
+
** 6-phosphogluconate dehydrogenase, C-terminal-like
−
** Homocysteine S-methyltransferase
+
** 3-hydroxyacyl-CoA dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.13 EC-2.1.1.13]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HOMO-CYS]][c] '''+''' 1 [[5-METHYL-THF-GLU-N]][c] '''=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[MET]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[3-HYDROXYADIPYL-COA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[3-KETO-ADIPYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-homocysteine[c] '''+''' 1 an N5-methyl-tetrahydrofolate[c] '''=>''' 1 a tetrahydrofolate[c] '''+''' 1 L-methionine[c]
+
** 1 NAD+[c] '''+''' 1 (3S)-hydroxyadipyl-CoA[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-oxoadipyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-06_000970]]
+
* Gene: [[Ec-19_005290]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-06_000980]]
+
* Gene: [[Ec-14_006530]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
+
* [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
+
* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine: [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSCAT-PWY ADENOSYLHOMOCYSCAT-PWY]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
+
−
** '''12''' reactions found over '''12''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 43: Line 35:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11172 11172]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34851 34851]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00946 R00946]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06941 R06941]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/Q57195 Q57195]
+
{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
−
** [http://www.uniprot.org/uniprot/Q9RVQ6 Q9RVQ6]
+
{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/O33259 O33259]
+
{{#set: ec number=EC-1.1.1.35}}
−
** [http://www.uniprot.org/uniprot/Q55786 Q55786]
+
{{#set: gene associated=Ec-19_005290|Ec-14_006530}}
−
** [http://www.uniprot.org/uniprot/Q09582 Q09582]
+
{{#set: in pathway=PWY-1361|PWY0-321}}
−
** [http://www.uniprot.org/uniprot/Q9Z2Q4 Q9Z2Q4]
+
−
** [http://www.uniprot.org/uniprot/P13009 P13009]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Methionine synthase}}
+
−
{{#set: common name=Homocysteine S-methyltransferase}}
+
−
{{#set: ec number=EC-2.1.1.13}}
+
−
{{#set: gene associated=Ec-06_000970|Ec-06_000980}}
+
−
{{#set: in pathway=PWY-3841|HOMOSER-METSYN-PWY|1CMET2-PWY|ADENOSYLHOMOCYSCAT-PWY|HSERMETANA-PWY|PWY-2201}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:56, 21 March 2018

Reaction RXN0-2044

  • direction:
    • REVERSIBLE
  • common name:
    • 6-phosphogluconate dehydrogenase, C-terminal-like
    • 3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1361, benzoyl-CoA degradation I (aerobic): PWY-1361
    • 2 reactions found over 7 reactions in the full pathway
  • PWY0-321, phenylacetate degradation I (aerobic): PWY0-321
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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