Difference between revisions of "Ec-27 005310"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.15-RXN 2.7.7.15-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytidyltransferase-li...")
(Created page with "Category:Gene == Gene Ec-27_005310 == * left end position: ** 4802685 * transcription direction: ** NEGATIVE * right end position: ** 4825664 * centisome position: ** 74.4...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.15-RXN 2.7.7.15-RXN] ==
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== Gene Ec-27_005310 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4802685
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* common name:
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* transcription direction:
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** Cytidyltransferase-like domain
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.7.15 EC-2.7.7.15]
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** 4825664
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* centisome position:
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** 74.4613   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0000_0226
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** Esi0000_0226
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CDP-CHOLINE]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 CTP[c] '''+''' 1 phosphocholine[c] '''=>''' 1 diphosphate[c] '''+''' 1 CDP-choline[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-15_001610]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY4FS-2]], phosphatidylcholine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-2 PWY4FS-2]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
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** '''6''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-3561]], choline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3561 PWY-3561]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4802685}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18997 18997]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4825664}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01890 R01890]
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{{#set: centisome position=74.4613    }}
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* UNIPROT:
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{{#set: common name=Esi_0000_0226|Esi0000_0226}}
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** [http://www.uniprot.org/uniprot/P19836 P19836]
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{{#set: reaction associated=ATPASE-RXN}}
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** [http://www.uniprot.org/uniprot/P49586 P49586]
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** [http://www.uniprot.org/uniprot/P49584 P49584]
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** [http://www.uniprot.org/uniprot/P49585 P49585]
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** [http://www.uniprot.org/uniprot/P49587 P49587]
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** [http://www.uniprot.org/uniprot/P93470 P93470]
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** [http://www.uniprot.org/uniprot/Q42619 Q42619]
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** [http://www.uniprot.org/uniprot/Q42620 Q42620]
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** [http://www.uniprot.org/uniprot/Q42621 Q42621]
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** [http://www.uniprot.org/uniprot/Q42622 Q42622]
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** [http://www.uniprot.org/uniprot/P13259 P13259]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Cytidyltransferase-like domain}}
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{{#set: ec number=EC-2.7.7.15}}
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{{#set: gene associated=Ec-15_001610}}
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{{#set: in pathway=PWY4FS-2|PWY-7782|PWY-3561|PWY3O-450}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:56, 21 March 2018

Gene Ec-27_005310

  • left end position:
    • 4802685
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4825664
  • centisome position:
    • 74.4613
  • Synonym(s):
    • Esi_0000_0226
    • Esi0000_0226

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_005310&oldid=30435"