Difference between revisions of "RXN-17796"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACETOACETYLCOATHIOL-RXN METHYLACETOACETYLCOATHIOL-RXN] == * direction: ** REVERSIBLE * common...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17796 RXN-17796] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA dehydrogenase ** A...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACETOACETYLCOATHIOL-RXN METHYLACETOACETYLCOATHIOL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17796 RXN-17796] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Thiolase, C-terminal
+
** acyl-CoA dehydrogenase
−
** Acetyl-CoA acetyltransferase
+
** Acyl-CoA dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.9 EC-2.3.1.9]
+
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-METHYL-ACETO-ACETYL-COA]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[PROPIONYL-COA]][c]
+
** 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-19148]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD-19150]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-methylacetoacetyl-CoA[c] '''+''' 1 coenzyme A[c] '''<=>''' 1 acetyl-CoA[c] '''+''' 1 propanoyl-CoA[c]
+
** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''+''' 1 (5Z)-dodecenoyl-CoA[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 (2E,5Z)-dodecenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-26_003940]]
+
* Gene: [[Ec-03_003490]]
−
** Source: [[orthology-aragem]]
+
−
* Gene: [[Ec-22_002850]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-24_000870]]
+
* Gene: [[Ec-14_001600]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-16_004260]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5109]], 2-methylbutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30721 30721]
+
{{#set: common name=acyl-CoA dehydrogenase}}
−
* LIGAND-RXN:
+
{{#set: common name=Acyl-CoA dehydrogenase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00927 R00927]
+
{{#set: ec number=EC-1.3.8}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: gene associated=Ec-03_003490|Ec-14_001600|Ec-16_004260}}
−
{{#set: common name=Thiolase, C-terminal}}
+
{{#set: in pathway=}}
−
{{#set: common name=Acetyl-CoA acetyltransferase}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: ec number=EC-2.3.1.9}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: gene associated=Ec-26_003940|Ec-22_002850|Ec-24_000870}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: in pathway=PWY-5109|ILEUDEG-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:57, 21 March 2018

Reaction RXN-17796

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA dehydrogenase
    • Acyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized electron-transfer flavoprotein[c] + 1 H+[c] + 1 (5Z)-dodecenoyl-CoA[c] => 1 a reduced electron-transfer flavoprotein[c] + 1 (2E,5Z)-dodecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-17796&oldid=30529"