Difference between revisions of "Ec-02 005260"

Revision as of 00:20, 10 January 2018

Reaction HEMN-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • Radical SAM
• ec number:
  • EC-1.3.98.c
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 COPROPORPHYRINOGEN_III[c] + 2 S-ADENOSYLMETHIONINE[c] => 2 MET[c] + 2 CARBON-DIOXIDE[c] + 2 CH33ADO[c] + 1 PROTOPORPHYRINOGEN[c]
• With common name(s):
  • 1 coproporphyrinogen III[c] + 2 S-adenosyl-L-methionine[c] => 2 L-methionine[c] + 2 CO2[c] + 2 5'-deoxyadenosine[c] + 1 protoporphyrinogen IX[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Ec-14_004300
  • ESILICULOSUS_GENOME
    • AUTOMATED-NAME-MATCH
• Ec-26_002590
  • ESILICULOSUS_GENOME
    • AUTOMATED-NAME-MATCH
  • pantograph-aragem
• Ec-20_000950
  • ESILICULOSUS_GENOME
    • AUTOMATED-NAME-MATCH
• Ec-26_001240
  • ESILICULOSUS_GENOME
    • AUTOMATED-NAME-MATCH
• Ec-19_002210
  • ESILICULOSUS_GENOME
    • AUTOMATED-NAME-MATCH

Pathways

• PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
  • 4 reactions found over 9 reactions in the full pathway
• HEMESYN2-PWY, heme biosynthesis II (anaerobic): HEMESYN2-PWY
  • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

• orthology:
  • pantograph:
    • aragem
• annotation:
  • pathwaytools:
    • esiliculosus_genome

External links

• RHEA:
  • 15425
• LIGAND-RXN:
  • R06895