Difference between revisions of "RXN-8642"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665] == * direction: ** LEFT-TO-RIGHT * common name: ** Indoleamine 2,3-dioxygenase *...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** superpathway of 5-aminoimidazole ribonucleotide biosynthesis
+
** Indoleamine 2,3-dioxygenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.13.11.11 EC-1.13.11.11]
 +
** [http://enzyme.expasy.org/EC/1.13.11.52 EC-1.13.11.52]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
  '''5''' reactions found over '''9''' reactions in the full pathway
+
* With identifiers:
−
* [[FGAMSYN-RXN]]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[TRP]][c] '''=>''' 1 [[N-FORMYLKYNURENINE]][c]
−
* [[GLYRIBONUCSYN-RXN]]
+
* With common name(s):
−
* [[PRPPAMIDOTRANS-RXN]]
+
** 1 oxygen[c] '''+''' 1 L-tryptophan[c] '''=>''' 1 N-formylkynurenine[c]
−
* [[PWY-6121]]
+
 
−
* [[PWY-6122]]
+
== Genes associated with this reaction  ==
−
== Reaction(s) not found ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN]
+
* [[Ec-20_001720]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=GARTRANSFORMYL2-RXN GARTRANSFORMYL2-RXN]
+
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
== Pathways ==
 +
* [[PWY-7765]], 3-hydroxy-4-methyl-anthranilate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7765 PWY-7765]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[TRPCAT-PWY]], L-tryptophan degradation I (via anthranilate): [http://metacyc.org/META/NEW-IMAGE?object=TRPCAT-PWY TRPCAT-PWY]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
 +
** '''8''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-7717]], 3-hydroxy-4-methyl-anthranilate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7717 PWY-7717]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
* RHEA:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6277 PWY-6277]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24536 24536]
−
{{#set: taxonomic range=TAX-2}}
+
* LIGAND-RXN:
−
{{#set: common name=superpathway of 5-aminoimidazole ribonucleotide biosynthesis}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00678 R00678]
−
{{#set: reaction found=5}}
+
* UNIPROT:
−
{{#set: reaction not found=9}}
+
** [http://www.uniprot.org/uniprot/P21643 P21643]
−
{{#set: completion rate=56.0}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Indoleamine 2,3-dioxygenase}}
 +
{{#set: ec number=EC-1.13.11.11}}
 +
{{#set: ec number=EC-1.13.11.52}}
 +
{{#set: gene associated=Ec-20_001720}}
 +
{{#set: in pathway=PWY-7765|PWY-5651|TRPCAT-PWY|PWY-6309|PWY-7717}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 20:23, 17 March 2018

Reaction RXN-8665

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7765, 3-hydroxy-4-methyl-anthranilate biosynthesis II: PWY-7765
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5651, L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: PWY-5651
    • 2 reactions found over 5 reactions in the full pathway
  • TRPCAT-PWY, L-tryptophan degradation I (via anthranilate): TRPCAT-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6309, L-tryptophan degradation XI (mammalian, via kynurenine): PWY-6309
    • 8 reactions found over 17 reactions in the full pathway
  • PWY-7717, 3-hydroxy-4-methyl-anthranilate biosynthesis I: PWY-7717
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-8642&oldid=8663"