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| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14897 RXN-14897] == | + | == Gene Ec-11_002580 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 2701692 |
| − | * common name: | + | * transcription direction: |
| − | ** Pectin lyase fold | + | ** POSITIVE |
| − | * ec number: | + | * right end position: |
| − | ** [http://enzyme.expasy.org/EC/4.2.2.10 EC-4.2.2.10] | + | ** 2707558 |
| | + | * centisome position: |
| | + | ** 42.954514 |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** Esi_0048_0022 |
| | + | ** Esi0048_0022 |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * [[1.14.11.2-RXN]] |
| − | ** 1 [[Pectin]][c] '''=>''' 1 [[CPD-11241]][c]
| + | ** esiliculosus_genome |
| − | * With common name(s):
| + | ***automated-name-match |
| − | ** 1 a pectin[c] '''=>''' 1 4-(4-deoxy-α-D-galact-4-enuronosyl)-D-galacturonate[c]
| + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Ec-12_000410]]
| + | |
| − | ** ESILICULOSUS_GENOME | + | |
| − | ***AUTOMATED-NAME-MATCH | + | |
| − | * [[Ec-13_002330]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-00_006370]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-18_004360]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-09_004230]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-25_001080]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-21_001360]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-08_000860]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-21_003140]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-00_011490]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-20_003120]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-14_000350]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-21_001490]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-09_004260]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-04_001770]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-14_004740]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-02_001170]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-08_000940]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-00_009490]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-20_003100]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-08_000930]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-14_000190]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-02_001160]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-08_000920]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-13_002640]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-00_010800]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-13_002310]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-23_004040]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-13_002650]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-7243]], pectin degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7243 PWY-7243]
| + | |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[esiliculosus_genome]]
| + | |
| | == External links == | | == External links == |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: left end position=2701692}} |
| − | {{#set: common name=Pectin lyase fold}} | + | {{#set: transcription direction=POSITIVE}} |
| − | {{#set: ec number=EC-4.2.2.10}} | + | {{#set: right end position=2707558}} |
| − | {{#set: gene associated=Ec-12_000410|Ec-13_002330|Ec-00_006370|Ec-18_004360|Ec-09_004230|Ec-25_001080|Ec-21_001360|Ec-08_000860|Ec-21_003140|Ec-00_011490|Ec-20_003120|Ec-14_000350|Ec-21_001490|Ec-09_004260|Ec-04_001770|Ec-14_004740|Ec-02_001170|Ec-08_000940|Ec-00_009490|Ec-20_003100|Ec-08_000930|Ec-14_000190|Ec-02_001160|Ec-08_000920|Ec-13_002640|Ec-00_010800|Ec-13_002310|Ec-23_004040|Ec-13_002650}} | + | {{#set: centisome position=42.954514 }} |
| − | {{#set: in pathway=PWY-7243}} | + | {{#set: common name=Esi_0048_0022|Esi0048_0022}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reaction associated=1.14.11.2-RXN}} |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=esiliculosus_genome}}
| + | |
