Difference between revisions of "RXN-8631"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-20_000830 == * left end position: ** 754171 * transcription direction: ** POSITIVE * right end position: ** 764645 * centisome position: ** 14.625...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinate dehydrogenase/fum...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-20_000830 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] ==
−
* left end position:
+
* direction:
−
** 754171
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
−
* right end position:
+
** SDH4, succinate dehydrogenase subunit 4
−
** 764645
+
** SDH1, succinate dehydrogenase subunit 1
−
* centisome position:
+
** SDH3, succinate dehydrogenase subunit 3
−
** 14.625862   
+
** SDH2, succinate dehydrogenase subunit 2
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0195_0002
 
−
** Esi0195_0002
 
−
** MPI1
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[MANNPISOM-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[SUC]][c] '''+''' 1 [[CPD-9612]][c] '''=>''' 1 [[CPD-15301]][c] '''+''' 1 [[FUM]][c]
−
***ec-number
+
* With common name(s):
−
** [[pantograph]]-[[aragem]]
+
** 1 succinate[c] '''+''' 1 caldariellaquinone[c] '''=>''' 1 caldariellaquinol[c] '''+''' 1 fumarate[c]
−
== Pathways associated ==
+
 
−
* [[MANNCAT-PWY]]
+
== Genes associated with this reaction  ==
−
* [[PWY-882]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[PWY-3881]]
+
* [[Ec-07_002870]]
−
* [[PWY-7456]]
+
** ESILICULOSUS_GENOME
−
* [[PWY-5659]]
+
***EC-NUMBER
−
* [[PWY-6992]]
+
* [[Ec-05_003640]]
−
* [[PWY-3861]]
+
** ESILICULOSUS_GENOME
−
* [[PWY-7586]]
+
***AUTOMATED-NAME-MATCH
 +
* [[Ec-21_003470]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-11_000360]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-07_007310]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-27_006560]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=754171}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain}}
−
{{#set: right end position=764645}}
+
{{#set: common name=SDH4, succinate dehydrogenase subunit 4}}
−
{{#set: centisome position=14.625862    }}
+
{{#set: common name=SDH1, succinate dehydrogenase subunit 1}}
−
{{#set: common name=Esi_0195_0002|Esi0195_0002|MPI1}}
+
{{#set: common name=SDH3, succinate dehydrogenase subunit 3}}
−
{{#set: reaction associated=MANNPISOM-RXN}}
+
{{#set: common name=SDH2, succinate dehydrogenase subunit 2}}
−
{{#set: pathway associated=MANNCAT-PWY|PWY-882|PWY-3881|PWY-7456|PWY-5659|PWY-6992|PWY-3861|PWY-7586}}
+
{{#set: ec number=EC-1.3.5.1}}
 +
{{#set: gene associated=Ec-07_002870|Ec-05_003640|Ec-21_003470|Ec-11_000360|Ec-07_007310|Ec-27_006560}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 21:28, 17 March 2018

Reaction RXN-15378

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
    • SDH4, succinate dehydrogenase subunit 4
    • SDH1, succinate dehydrogenase subunit 1
    • SDH3, succinate dehydrogenase subunit 3
    • SDH2, succinate dehydrogenase subunit 2
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 succinate[c] + 1 caldariellaquinone[c] => 1 caldariellaquinol[c] + 1 fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-8631&oldid=9060"