Difference between revisions of "OLIGOPEPTIDES"

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(Created page with "Category:Gene == Gene Ec-00_010830 == * left end position: ** 18092586 * transcription direction: ** NEGATIVE * right end position: ** 18095646 * centisome position: ** 95...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=F16BDEPHOS-RXN F16BDEPHOS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** fructose 1,6-bisp...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-00_010830 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=F16BDEPHOS-RXN F16BDEPHOS-RXN] ==
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* left end position:
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* direction:
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** 18092586
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** fructose 1,6-bisphosphate 1-phosphatase
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* right end position:
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** cytosolic fructose-1,6-bisphosphatase
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** 18095646
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** Fructose-1,6-bisphosphatase
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* centisome position:
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** Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase
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** 95.49337   
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* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.11 EC-3.1.3.11]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0888_0002
 
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** Esi0888_0002
 
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** GSR
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GLUTATHIONE-REDUCT-NADPH-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[FRUCTOSE-6P]][c]
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***ec-number
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* With common name(s):
 +
** 1 fructose 1,6-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 β-D-fructofuranose 6-phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-12_004070]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-04_004710]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
 +
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
−
== Pathways associated ==
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* [[Ec-14_005760]]
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* [[PWY-4081]]
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** ESILICULOSUS_GENOME
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* [[GLUT-REDOX-PWY]]
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***EC-NUMBER
 +
* [[Ec-06_004200]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-17_003090]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-21_001790]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-22_000360]]
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** ESILICULOSUS_GENOME
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***GO-TERM
 +
== Pathways ==
 +
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
 +
** '''12''' reactions found over '''12''' reactions in the full pathway
 +
* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
 +
** '''11''' reactions found over '''11''' reactions in the full pathway
 +
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=18092586}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11064 11064]
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{{#set: right end position=18095646}}
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* LIGAND-RXN:
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{{#set: centisome position=95.49337    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00762 R00762]
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{{#set: common name=Esi_0888_0002|Esi0888_0002|GSR}}
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* UNIPROT:
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{{#set: reaction associated=GLUTATHIONE-REDUCT-NADPH-RXN}}
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** [http://www.uniprot.org/uniprot/P09199 P09199]
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{{#set: pathway associated=PWY-4081|GLUT-REDOX-PWY}}
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** [http://www.uniprot.org/uniprot/P19112 P19112]
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** [http://www.uniprot.org/uniprot/P22780 P22780]
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** [http://www.uniprot.org/uniprot/P09467 P09467]
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** [http://www.uniprot.org/uniprot/Q9JUL6 Q9JUL6]
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** [http://www.uniprot.org/uniprot/Q9CIU9 Q9CIU9]
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** [http://www.uniprot.org/uniprot/P09202 P09202]
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** [http://www.uniprot.org/uniprot/Q45597 Q45597]
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** [http://www.uniprot.org/uniprot/P45292 P45292]
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** [http://www.uniprot.org/uniprot/Q9PP83 Q9PP83]
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** [http://www.uniprot.org/uniprot/P19912 P19912]
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** [http://www.uniprot.org/uniprot/P19911 P19911]
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** [http://www.uniprot.org/uniprot/Q9HGZ4 Q9HGZ4]
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** [http://www.uniprot.org/uniprot/P09201 P09201]
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** [http://www.uniprot.org/uniprot/P0A993 P0A993]
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** [http://www.uniprot.org/uniprot/P00636 P00636]
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** [http://www.uniprot.org/uniprot/P23014 P23014]
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** [http://www.uniprot.org/uniprot/P27994 P27994]
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** [http://www.uniprot.org/uniprot/P14766 P14766]
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** [http://www.uniprot.org/uniprot/P09195 P09195]
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** [http://www.uniprot.org/uniprot/Q7M0S7 Q7M0S7]
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** [http://www.uniprot.org/uniprot/P25851 P25851]
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** [http://www.uniprot.org/uniprot/Q05079 Q05079]
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** [http://www.uniprot.org/uniprot/P46275 P46275]
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** [http://www.uniprot.org/uniprot/P46276 P46276]
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** [http://www.uniprot.org/uniprot/Q43139 Q43139]
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** [http://www.uniprot.org/uniprot/P00637 P00637]
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** [http://www.uniprot.org/uniprot/O65827 O65827]
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** [http://www.uniprot.org/uniprot/Q42796 Q42796]
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** [http://www.uniprot.org/uniprot/P46267 P46267]
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** [http://www.uniprot.org/uniprot/Q07204 Q07204]
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** [http://www.uniprot.org/uniprot/P22418 P22418]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=fructose 1,6-bisphosphate 1-phosphatase}}
 +
{{#set: common name=cytosolic fructose-1,6-bisphosphatase}}
 +
{{#set: common name=Fructose-1,6-bisphosphatase}}
 +
{{#set: common name=Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase}}
 +
{{#set: ec number=EC-3.1.3.11}}
 +
{{#set: gene associated=Ec-12_004070|Ec-04_004710|Ec-14_005760|Ec-06_004200|Ec-17_003090|Ec-21_001790|Ec-22_000360}}
 +
{{#set: in pathway=GLYCOLYSIS|SUCSYN-PWY|CALVIN-PWY|GLUCONEO-PWY|PWY-5484|P185-PWY|PWY66-399}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 20:31, 17 March 2018

Reaction F16BDEPHOS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • fructose 1,6-bisphosphate 1-phosphatase
    • cytosolic fructose-1,6-bisphosphatase
    • Fructose-1,6-bisphosphatase
    • Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 fructose 1,6-bisphosphate[c] + 1 H2O[c] => 1 phosphate[c] + 1 β-D-fructofuranose 6-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
    • 12 reactions found over 12 reactions in the full pathway
  • SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
    • 6 reactions found over 9 reactions in the full pathway
  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
    • 11 reactions found over 11 reactions in the full pathway
  • P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=OLIGOPEPTIDES&oldid=9281"