Difference between revisions of "TCP26"

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(Created page with "Category:Gene == Gene Ec-27_004070 == * left end position: ** 3546837 * transcription direction: ** POSITIVE * right end position: ** 3548001 * centisome position: ** 54.9...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-902 RXN-902] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain ** B...")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Ec-27_004070 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-902 RXN-902] ==
* left end position:
+
* direction:
** 3546837
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
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** ClpP/crotonase-like domain
* right end position:
+
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
** 3548001
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
* centisome position:
+
* ec number:
** 54.990513   
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
** Esi_0000_0441
 
** Esi0000_0441
 
  
== Reactions associated ==
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== Reaction Formula ==
* [[4OH2OXOGLUTARALDOL-RXN]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[E-PHENYLITACONYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CARBOXYMETHYL-HYDROXYPHENYLPROPCOA]][c]
***automated-name-match
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* With common name(s):
* [[KDPGALDOL-RXN]]
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** 1 (E)-2-benzylidenesuccinyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA[c]
** esiliculosus_genome
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***automated-name-match
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== Genes associated with this reaction  ==
* [[RXN-13990]]
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Genes have been associated with this reaction based on different elements listed below.
** esiliculosus_genome
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* [[Ec-16_001250]]
***automated-name-match
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** ESILICULOSUS_GENOME
== Pathways associated ==
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***EC-NUMBER
* [[PWY-2221]]
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* [[Ec-16_003560]]
* [[PWY-7310]]
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** ESILICULOSUS_GENOME
* [[PWY-6507]]
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***EC-NUMBER
* [[GALACTUROCAT-PWY]]
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* [[Ec-06_001380]]
* [[ENTNER-DOUDOROFF-PWY]]
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** ESILICULOSUS_GENOME
* [[PWY-7562]]
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***EC-NUMBER
* [[HYDROXYPRODEG-PWY]]
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* [[Ec-14_006530]]
* [[PWY-7242]]
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** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-81]], toluene degradation to benzoyl-CoA (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-81 PWY-81]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=3546837}}
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* LIGAND-RXN:
{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05599 R05599]
{{#set: right end position=3548001}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=54.990513    }}
+
{{#set: common name=ClpP/crotonase-like domain}}
{{#set: common name=Esi_0000_0441|Esi0000_0441}}
+
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
{{#set: reaction associated=4OH2OXOGLUTARALDOL-RXN|KDPGALDOL-RXN|RXN-13990}}
+
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
{{#set: pathway associated=PWY-2221|PWY-7310|PWY-6507|GALACTUROCAT-PWY|ENTNER-DOUDOROFF-PWY|PWY-7562|HYDROXYPRODEG-PWY|PWY-7242}}
+
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: gene associated=Ec-16_001250|Ec-16_003560|Ec-06_001380|Ec-14_006530}}
 +
{{#set: in pathway=PWY-81}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 20:32, 17 March 2018

Reaction RXN-902

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ClpP/crotonase-like domain
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-81, toluene degradation to benzoyl-CoA (anaerobic): PWY-81
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links