Difference between revisions of "Ec-22 002520"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] == * direction: ** REVERSIBLE * common name: ** Ureohydrolase * ec numbe...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
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** Ureohydrolase
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** Methanobacterium thermoautotrophicum biosynthetic metabolism
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.3.1 EC-3.5.3.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''16''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[ARG]][c] '''<=>''' 1 [[UREA]][c] '''+''' 1 [[L-ORNITHINE]][c]
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* [[ALANINE-SYN2-PWY]]
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* With common name(s):
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** 0 associated gene:
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** 1 H2O[c] '''+''' 1 L-arginine[c] '''<=>''' 1 urea[c] '''+''' 1 L-ornithine[c]
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* [[ASPARTATESYN-PWY]]
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** 0 associated gene:
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== Genes associated with this reaction  ==
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* [[CODH-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* [[Ec-22_003700]]
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* [[P42-PWY]]
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** [[pantograph]]-[[aragem]]
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** 0 associated gene:
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* [[Ec-10_001100]]
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* [[PEPCARBOX-RXN]]
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** ESILICULOSUS_GENOME
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Ec-28_003470]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
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*** [[annotation-esiliculosus_genome]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5910]]
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* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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** 0 associated gene:
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6141]]
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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** 0 associated gene:
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6142]]
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* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
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** 0 associated gene:
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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** 1 associated gene(s):
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[Ec-03_001890]]
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* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
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** 1 reconstruction source(s) associated:
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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== Reaction(s) not found ==
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20569 20569]
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{{#set: common name=Methanobacterium thermoautotrophicum biosynthetic metabolism}}
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* LIGAND-RXN:
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{{#set: reaction found=9}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00551 R00551]
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{{#set: total reaction=16}}
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* UNIPROT:
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{{#set: completion rate=56.0}}
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** [http://www.uniprot.org/uniprot/P05089 P05089]
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** [http://www.uniprot.org/uniprot/P07824 P07824]
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** [http://www.uniprot.org/uniprot/P40906 P40906]
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** [http://www.uniprot.org/uniprot/Q7M0Z3 Q7M0Z3]
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** [http://www.uniprot.org/uniprot/P14012 P14012]
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** [http://www.uniprot.org/uniprot/P37818 P37818]
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** [http://www.uniprot.org/uniprot/P49900 P49900]
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** [http://www.uniprot.org/uniprot/P39138 P39138]
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** [http://www.uniprot.org/uniprot/P53608 P53608]
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** [http://www.uniprot.org/uniprot/P72703 P72703]
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** [http://www.uniprot.org/uniprot/O68051 O68051]
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** [http://www.uniprot.org/uniprot/O49046 O49046]
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** [http://www.uniprot.org/uniprot/O76895 O76895]
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** [http://www.uniprot.org/uniprot/P33280 P33280]
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** [http://www.uniprot.org/uniprot/Q10066 Q10066]
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** [http://www.uniprot.org/uniprot/P00812 P00812]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Ureohydrolase}}
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{{#set: ec number=EC-3.5.3.1}}
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{{#set: gene associated=Ec-22_003700|Ec-10_001100}}
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{{#set: in pathway=ARGASEDEG-PWY|PWY-6922|ARG-PRO-PWY|ARG-GLU-PWY|PWY-4984|PWY-6305|CITRULBIO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 20:34, 17 March 2018

Pathway PWY-6146

  • taxonomic range:
  • common name:
    • Methanobacterium thermoautotrophicum biosynthetic metabolism
  • Synonym(s):

Reaction(s) found

9 reactions found over 16 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-22_002520&oldid=9473"