Difference between revisions of "1.8.4.12-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2043 RXN-2043] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycoside hydrolase, catalyti...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2043 RXN-2043] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
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** Glycoside hydrolase, catalytic domain
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** purine nucleobases degradation I (anaerobic)
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** Glycoside hydrolase/deacetylase, beta/alpha-barrel
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.4 EC-3.2.1.4]
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* Synonym(s):
 
* Synonym(s):
 +
** purine fermentation
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''17''' reactions in the full pathway
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** n [[WATER]][c] '''+''' 1 [[CELLULOSE]][c] '''=>''' n [[Cellodextrins]][c]
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* [[FORMYLTHFDEFORMYL-RXN]]
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* With common name(s):
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** 0 associated gene:
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** n H2O[c] '''+''' 1 cellulose[c] '''=>''' n a cellodextrin[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[METHENYLTHFCYCLOHYDRO-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 associated gene(s):
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* [[Ec-08_004650]]
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*** [[Ec-15_001370]]
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** ESILICULOSUS_GENOME
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*** [[Ec-14_004070]]
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***AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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* [[Ec-23_003530]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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* [[RXN-7682]]
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***AUTOMATED-NAME-MATCH
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** 2 associated gene(s):
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* [[Ec-19_000430]]
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*** [[Ec-20_000210]]
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** ESILICULOSUS_GENOME
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*** [[Ec-20_000230]]
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***AUTOMATED-NAME-MATCH
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-6788]], cellulose degradation II (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6788 PWY-6788]
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*** [[orthology-aragem]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[RXN0-901]]
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== Reconstruction information  ==
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** 2 associated gene(s):
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* [[annotation]]:
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*** [[Ec-20_000230]]
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** [[pathwaytools]]:
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*** [[Ec-20_000210]]
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*** [[esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.2-RXN 1.2.1.2-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.4-RXN 4.3.1.4-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-FORMIMINOTRANSFERASE-RXN GLYCINE-FORMIMINOTRANSFERASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R127-RXN R127-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R128-RXN R128-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R13-RXN R13-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R62-RXN R62-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R63-RXN R63-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7566 RXN-7566]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8752 RXN-8752]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8755 RXN-8755]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: taxonomic range=TAX-1239}}
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** [http://www.uniprot.org/uniprot/O64949 O64949]
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{{#set: common name=purine nucleobases degradation I (anaerobic)}}
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** [http://www.uniprot.org/uniprot/O64402 O64402]
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{{#set: common name=purine fermentation}}
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** [http://www.uniprot.org/uniprot/O59943 O59943]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/P22503 P22503]
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{{#set: total reaction=17}}
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** [http://www.uniprot.org/uniprot/O50014 O50014]
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{{#set: completion rate=24.0}}
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** [http://www.uniprot.org/uniprot/O50013 O50013]
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** [http://www.uniprot.org/uniprot/O50012 O50012]
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** [http://www.uniprot.org/uniprot/O50011 O50011]
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** [http://www.uniprot.org/uniprot/O64401 O64401]
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** [http://www.uniprot.org/uniprot/O23954 O23954]
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** [http://www.uniprot.org/uniprot/O22298 O22298]
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** [http://www.uniprot.org/uniprot/O22297 O22297]
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** [http://www.uniprot.org/uniprot/O04890 O04890]
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** [http://www.uniprot.org/uniprot/Q39848 Q39848]
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** [http://www.uniprot.org/uniprot/Q39847 Q39847]
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** [http://www.uniprot.org/uniprot/O04972 O04972]
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** [http://www.uniprot.org/uniprot/Q41012 Q41012]
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** [http://www.uniprot.org/uniprot/Q39826 Q39826]
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** [http://www.uniprot.org/uniprot/Q42872 Q42872]
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** [http://www.uniprot.org/uniprot/Q42871 Q42871]
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** [http://www.uniprot.org/uniprot/Q9SVJ2 Q9SVJ2]
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** [http://www.uniprot.org/uniprot/Q9SVJ3 Q9SVJ3]
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** [http://www.uniprot.org/uniprot/Q9SVJ4 Q9SVJ4]
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** [http://www.uniprot.org/uniprot/Q9SUS0 Q9SUS0]
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** [http://www.uniprot.org/uniprot/Q9SZ90 Q9SZ90]
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** [http://www.uniprot.org/uniprot/O64890 O64890]
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** [http://www.uniprot.org/uniprot/O64889 O64889]
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** [http://www.uniprot.org/uniprot/O82513 O82513]
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** [http://www.uniprot.org/uniprot/O80497 O80497]
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** [http://www.uniprot.org/uniprot/O64891 O64891]
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** [http://www.uniprot.org/uniprot/O81416 O81416]
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** [http://www.uniprot.org/uniprot/O48766 O48766]
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** [http://www.uniprot.org/uniprot/Q55365 Q55365]
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** [http://www.uniprot.org/uniprot/Q38890 Q38890]
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** [http://www.uniprot.org/uniprot/Q12665 Q12665]
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** [http://www.uniprot.org/uniprot/Q43751 Q43751]
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** [http://www.uniprot.org/uniprot/Q9SML6 Q9SML6]
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** [http://www.uniprot.org/uniprot/Q43750 Q43750]
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** [http://www.uniprot.org/uniprot/Q38817 Q38817]
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** [http://www.uniprot.org/uniprot/P43317 P43317]
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** [http://www.uniprot.org/uniprot/Q42875 Q42875]
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** [http://www.uniprot.org/uniprot/Q42660 Q42660]
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** [http://www.uniprot.org/uniprot/Q59665 Q59665]
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** [http://www.uniprot.org/uniprot/Q59395 Q59395]
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** [http://www.uniprot.org/uniprot/Q43149 Q43149]
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** [http://www.uniprot.org/uniprot/Q12624 Q12624]
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** [http://www.uniprot.org/uniprot/P38534 P38534]
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** [http://www.uniprot.org/uniprot/P23666 P23666]
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** [http://www.uniprot.org/uniprot/P19424 P19424]
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** [http://www.uniprot.org/uniprot/P07982 P07982]
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** [http://www.uniprot.org/uniprot/Q05156 Q05156]
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** [http://www.uniprot.org/uniprot/Q7M0M9 Q7M0M9]
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** [http://www.uniprot.org/uniprot/Q9R5L7 Q9R5L7]
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** [http://www.uniprot.org/uniprot/Q53302 Q53302]
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** [http://www.uniprot.org/uniprot/P26224 P26224]
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** [http://www.uniprot.org/uniprot/P21834 P21834]
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** [http://www.uniprot.org/uniprot/P21833 P21833]
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** [http://www.uniprot.org/uniprot/P22669 P22669]
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** [http://www.uniprot.org/uniprot/P05522 P05522]
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** [http://www.uniprot.org/uniprot/P07103 P07103]
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** [http://www.uniprot.org/uniprot/P10474 P10474]
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** [http://www.uniprot.org/uniprot/Q46002 Q46002]
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** [http://www.uniprot.org/uniprot/P16630 P16630]
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** [http://www.uniprot.org/uniprot/Q59241 Q59241]
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** [http://www.uniprot.org/uniprot/P13933 P13933]
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** [http://www.uniprot.org/uniprot/P07985 P07985]
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** [http://www.uniprot.org/uniprot/P19570 P19570]
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** [http://www.uniprot.org/uniprot/P20847 P20847]
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** [http://www.uniprot.org/uniprot/P23549 P23549]
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** [http://www.uniprot.org/uniprot/P23550 P23550]
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** [http://www.uniprot.org/uniprot/P19487 P19487]
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** [http://www.uniprot.org/uniprot/P16218 P16218]
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** [http://www.uniprot.org/uniprot/P23340 P23340]
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** [http://www.uniprot.org/uniprot/Q01409 Q01409]
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** [http://www.uniprot.org/uniprot/O67401 O67401]
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** [http://www.uniprot.org/uniprot/Q7M4T4 Q7M4T4]
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** [http://www.uniprot.org/uniprot/P28622 P28622]
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** [http://www.uniprot.org/uniprot/P94622 P94622]
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** [http://www.uniprot.org/uniprot/Q45554 Q45554]
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** [http://www.uniprot.org/uniprot/Q59963 Q59963]
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** [http://www.uniprot.org/uniprot/P54937 P54937]
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** [http://www.uniprot.org/uniprot/Q03882 Q03882]
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** [http://www.uniprot.org/uniprot/P10475 P10475]
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** [http://www.uniprot.org/uniprot/P10477 P10477]
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** [http://www.uniprot.org/uniprot/P04954 P04954]
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** [http://www.uniprot.org/uniprot/P04956 P04956]
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** [http://www.uniprot.org/uniprot/P04955 P04955]
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** [http://www.uniprot.org/uniprot/Q01786 Q01786]
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** [http://www.uniprot.org/uniprot/P26221 P26221]
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** [http://www.uniprot.org/uniprot/P29719 P29719]
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** [http://www.uniprot.org/uniprot/P06565 P06565]
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** [http://www.uniprot.org/uniprot/Q59290 Q59290]
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** [http://www.uniprot.org/uniprot/Q12714 Q12714]
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** [http://www.uniprot.org/uniprot/P17877 P17877]
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** [http://www.uniprot.org/uniprot/P29019 P29019]
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** [http://www.uniprot.org/uniprot/P16216 P16216]
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** [http://www.uniprot.org/uniprot/P17974 P17974]
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** [http://www.uniprot.org/uniprot/P26222 P26222]
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** [http://www.uniprot.org/uniprot/Q53324 Q53324]
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** [http://www.uniprot.org/uniprot/Q05332 Q05332]
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** [http://www.uniprot.org/uniprot/P23548 P23548]
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** [http://www.uniprot.org/uniprot/P06564 P06564]
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** [http://www.uniprot.org/uniprot/Q45532 Q45532]
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** [http://www.uniprot.org/uniprot/P07983 P07983]
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** [http://www.uniprot.org/uniprot/P07981 P07981]
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** [http://www.uniprot.org/uniprot/P06566 P06566]
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** [http://www.uniprot.org/uniprot/P07984 P07984]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Glycoside hydrolase, catalytic domain}}
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{{#set: common name=Glycoside hydrolase/deacetylase, beta/alpha-barrel}}
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{{#set: ec number=EC-3.2.1.4}}
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{{#set: gene associated=Ec-08_004650|Ec-23_003530|Ec-19_000430}}
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{{#set: in pathway=PWY-6788}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 20:38, 17 March 2018

Pathway P164-PWY

  • taxonomic range:
  • common name:
    • purine nucleobases degradation I (anaerobic)
  • Synonym(s):
    • purine fermentation

Reaction(s) found

4 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=1.8.4.12-RXN&oldid=9708"