Difference between revisions of "Carboxylic-esters"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
 
* common name:
 
* common name:
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** Acetyl-CoA carboxylase, partial
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** Rubisco shunt
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** acetyl-CoA carboxylase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.4.1.2 EC-6.4.1.2]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''10''' reactions found over '''10''' reactions in the full pathway
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** 1 [[ACETYL-COA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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* [[1TRANSKETO-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 acetyl-CoA[c] '''+''' 1 ATP[c] '''+''' 1 hydrogen carbonate[c] '''=>''' 1 ADP[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
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*** [[Ec-20_002600]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-03_001890]]
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* [[2PGADEHYDRAT-RXN]]
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** [[pantograph]]-[[aragem]]
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** 3 associated gene(s):
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** [[pantograph]]-[[aragem]]
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*** [[Ec-27_004000]]
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* [[Ec-01_010970]]
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*** [[Ec-26_004120]]
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** [[pantograph]]-[[aragem]]
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*** [[Ec-14_005400]]
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** [[pantograph]]-[[aragem]]
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** 2 reconstruction source(s) associated:
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* [[Ec-01_009720]]
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*** [[annotation-esiliculosus_genome]]
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** [[pantograph]]-[[aragem]]
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*** [[orthology-aragem]]
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** [[pantograph]]-[[aragem]]
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* [[2TRANSKETO-RXN]]
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* [[Ec-14_002460]]
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** 1 associated gene(s):
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** [[pantograph]]-[[aragem]]
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*** [[Ec-20_002600]]
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** [[pantograph]]-[[aragem]]
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** 2 reconstruction source(s) associated:
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* [[Ec-19_003230]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***EC-NUMBER
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* [[3PGAREARR-RXN]]
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** [[pantograph]]-[[aragem]]
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** 7 associated gene(s):
−
** [[pantograph]]-[[aragem]]
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*** [[Ec-24_002670]]
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* [[Ec-20_002520]]
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*** [[Ec-03_002170]]
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** ESILICULOSUS_GENOME
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*** [[Ec-27_000330]]
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***EC-NUMBER
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*** [[Ec-03_002160]]
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** [[pantograph]]-[[aragem]]
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*** [[Ec-01_000980]]
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** [[pantograph]]-[[aragem]]
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*** [[Ec-06_009930]]
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* [[Ec-19_003040]]
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*** [[Ec-10_005410]]
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** ESILICULOSUS_GENOME
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** 2 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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*** [[orthology-aragem]]
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* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
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* [[PEPDEPHOS-RXN]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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** 3 associated gene(s):
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* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
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*** [[Ec-26_004170]]
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** '''6''' reactions found over '''16''' reactions in the full pathway
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*** [[Ec-12_000950]]
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* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
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*** [[Ec-06_006860]]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
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*** [[annotation-esiliculosus_genome]]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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*** [[orthology-aragem]]
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* [[PWY-6722]], candicidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6722 PWY-6722]
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* [[PHOSPHORIBULOKINASE-RXN]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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** 2 associated gene(s):
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* [[PWY-6679]], jadomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6679 PWY-6679]
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*** [[Ec-26_002450]]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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*** [[Ec-27_003910]]
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* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
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** 2 reconstruction source(s) associated:
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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*** [[orthology-aragem]]
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* [[orthology]]:
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* [[RIB5PISOM-RXN]]
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** [[pantograph]]:
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** 1 associated gene(s):
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*** [[aragem]]
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*** [[Ec-08_003540]]
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* [[annotation]]:
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** 2 reconstruction source(s) associated:
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** [[pathwaytools]]:
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*** [[annotation-esiliculosus_genome]]
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*** [[esiliculosus_genome]]
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*** [[orthology-aragem]]
 +
* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-12_007560]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[RIBULP3EPIM-RXN]]
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** 2 associated gene(s):
 +
*** [[Ec-07_002390]]
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*** [[Ec-27_003930]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
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* [[TRANSALDOL-RXN]]
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** 2 associated gene(s):
 +
*** [[Ec-01_002780]]
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*** [[Ec-06_003940]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-58024}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11308 11308]
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{{#set: common name=Rubisco shunt}}
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* LIGAND-RXN:
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{{#set: reaction found=10}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00742 R00742]
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{{#set: total reaction=10}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=100.0}}
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{{#set: common name=Acetyl-CoA carboxylase, partial}}
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−
{{#set: common name=acetyl-CoA carboxylase}}
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−
{{#set: ec number=EC-6.4.1.2}}
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−
{{#set: gene associated=Ec-03_001890|Ec-01_010970|Ec-01_009720|Ec-14_002460|Ec-19_003230|Ec-20_002520|Ec-19_003040}}
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−
{{#set: in pathway=PWY-7388|PWY-5789|PWY-5743|PWY-5744|PWY-6722|PWY-6679|PWY-4381}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=aragem}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 20:38, 17 March 2018

Pathway PWY-5723

  • taxonomic range:
  • common name:
    • Rubisco shunt
  • Synonym(s):

Reaction(s) found

10 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Carboxylic-esters&oldid=9744"