Manual

	Common name	Ec number	Reconstruction category	Reconstruction tool	Reconstruction source	Reconstruction comment	Gene associated	In pathway
Biomass rxn			Manual		Manual-2 biomass rxn	Forfba	None
Exchange BIOMASS			Manual		Manual-2 biomass rxn	Exchange biomass to boundary
ExchangeSeed ADENOSYLCOBALAMIN			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed AMMONIA			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed BIOTIN			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CA+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CARBON-DIOXIDE			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CL-			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CO+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed COB-I-ALAMIN			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CPD-3			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CPD-315			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CU+			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CU+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed EDTA			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed FE+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed FE+3			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed K+			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed Light			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed MG+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed MN+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NA+			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NITRATE			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed OXYGEN-MOLECULE			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed PROTON			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed SULFATE			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed THIAMINE			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed WATER			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed ZN+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
R07063			Manual		Manual-1 keggrxns to add	Reaction from kegg for the production of cpd-8117 (gamma-linolenate)
R07861			Manual		Manual-1 keggrxns to add	Reaction from kegg for the production of cpd-12653 (stearidonate)
R08184			Manual		Manual-1 keggrxns to add	Reaction from kegg for the production of docosanoate
R08190			Manual		Manual-1 keggrxns to add	Reaction from kegg for the production of eicosadienoates
RXN-14146		EC-4.1.2	Manual		Manual-2 cycrxns to add	Reaction added for curation	Ec-11 002460
RXN-1501 METACYC18.5			Manual		Manual-1 cycrxns to add	Reaction from metacyc 18.5 to produce linolenic acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic acid compound class only	Ec-21 005150 Ec-04 004650
RXN-15490			Manual		Manual-2 lightrxns to add	Exchange reaction for light
RXN-8349 PLANTCYC			Manual		Manual-1 cycrxns to add	Reaction from plantcyc20.5
Transport BIOMASS			Manual		Manual-2 biomass rxn	Transport biomass to external compartment
TransportSeed ADENOSYLCOBALAMIN			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed AMMONIA			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed BIOTIN			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed CA+2			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed CARBON-DIOXIDE			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed CL-			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed CO+2			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed COB-I-ALAMIN			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed CPD-3			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed CPD-315			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed CU+			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
TransportSeed CU+2			Manual		Manual-import from medium	Added to manage seeds from extracellular to cytosol compartment
... further results