Difference between revisions of "2-Me-Branched-234-Sat-FALD"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11057 RXN-11057] == * direction: ** LEFT-TO-RIGHT * common name: ** Aromatic-ring hydroxylase-l...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11057 RXN-11057] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
+
** Aromatic-ring hydroxylase-like
 +
** Monooxygenase, FAD-binding
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''14''' reactions found over '''17''' reactions in the full pathway
+
* With identifiers:
−
* [[CDPREDUCT-RXN]]
+
** 1 [[N-ACETYL-5-METHOXY-TRYPTAMINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[N-ACETYL-SEROTONIN]][c] '''+''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c]
−
** 7 associated gene(s):
+
* With common name(s):
−
*** [[Ec-06_005120]]
+
** 1 melatonin[c] '''+''' 1 oxygen[c] '''+''' 1 a reduced [NADPH-hemoprotein reductase][c] '''=>''' 1 H2O[c] '''+''' 1 N-acetyl-serotonin[c] '''+''' 1 formaldehyde[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c]
−
*** [[Ec-11_002170]]
+
 
−
*** [[Ec-19_000440]]
+
== Genes associated with this reaction  ==
−
*** [[Ec-11_002180]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[Ec-21_002920]]
+
* Gene: [[Ec-01_010880]]
−
*** [[Ec-17_003700]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-06_005570]]
+
*** Assignment: EC-NUMBER
−
** 2 reconstruction source(s) associated:
+
* Gene: [[Ec-00_001320]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[orthology-aragem]]
+
*** Assignment: EC-NUMBER
−
* [[DCDPKIN-RXN]]
+
* Gene: [[Ec-26_003280]]
−
** 7 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-04_001140]]
+
*** Assignment: EC-NUMBER
−
*** [[Ec-11_005170]]
+
== Pathways  ==
−
*** [[Ec-03_001380]]
+
* [[PWY-6398]], melatonin degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6398 PWY-6398]
−
*** [[Ec-26_003930]]
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
*** [[Ec-07_000140]]
+
== Reconstruction information  ==
−
*** [[Ec-22_003280]]
+
* Category: [[annotation]]
−
*** [[Ec-11_004330]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 2 reconstruction source(s) associated:
+
*** Tool: [[pathwaytools]]
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[DTDPKIN-RXN]]
+
−
** 7 associated gene(s):
+
−
*** [[Ec-26_003930]]
+
−
*** [[Ec-04_001140]]
+
−
*** [[Ec-11_004330]]
+
−
*** [[Ec-22_003280]]
+
−
*** [[Ec-11_005170]]
+
−
*** [[Ec-03_001380]]
+
−
*** [[Ec-07_000140]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[DTMPKI-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-20_004950]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[DUDPKIN-RXN]]
+
−
** 7 associated gene(s):
+
−
*** [[Ec-11_005170]]
+
−
*** [[Ec-11_004330]]
+
−
*** [[Ec-03_001380]]
+
−
*** [[Ec-04_001140]]
+
−
*** [[Ec-07_000140]]
+
−
*** [[Ec-22_003280]]
+
−
*** [[Ec-26_003930]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[DUTP-PYROP-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-13_002810]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[PWY-7184]]
+
−
** 0 associated gene:
+
−
* [[PWY-7187]]
+
−
** 0 associated gene:
+
−
* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
+
−
** 5 associated gene(s):
+
−
*** [[Ec-19_000440]]
+
−
*** [[Ec-11_002170]]
+
−
*** [[Ec-21_002920]]
+
−
*** [[Ec-06_005120]]
+
−
*** [[Ec-06_005570]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RXN0-722]]
+
−
** 5 associated gene(s):
+
−
*** [[Ec-06_005120]]
+
−
*** [[Ec-11_002170]]
+
−
*** [[Ec-21_002920]]
+
−
*** [[Ec-06_005570]]
+
−
*** [[Ec-19_000440]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RXN0-723]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-04_006460]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RXN0-724]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-04_006460]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[THYMIDYLATESYN-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-27_004630]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[UDPREDUCT-RXN]]
+
−
** 7 associated gene(s):
+
−
*** [[Ec-19_000440]]
+
−
*** [[Ec-21_002920]]
+
−
*** [[Ec-17_003700]]
+
−
*** [[Ec-11_002180]]
+
−
*** [[Ec-06_005120]]
+
−
*** [[Ec-06_005570]]
+
−
*** [[Ec-11_002170]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=DCTP-DEAM-RXN DCTP-DEAM-RXN]
+
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-166 PWY0-166]
+
{{#set: common name=Aromatic-ring hydroxylase-like}}
−
{{#set: taxonomic range=TAX-2157}}
+
{{#set: common name=Monooxygenase, FAD-binding}}
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: ec number=EC-1.14.14.1}}
−
{{#set: common name=superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)}}
+
{{#set: gene associated=Ec-01_010880|Ec-00_001320|Ec-26_003280}}
−
{{#set: reaction found=14}}
+
{{#set: in pathway=PWY-6398}}
−
{{#set: total reaction=17}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: completion rate=82.0}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:24, 21 March 2018

Reaction RXN-11057

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aromatic-ring hydroxylase-like
    • Monooxygenase, FAD-binding
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6398, melatonin degradation I: PWY-6398
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=2-Me-Branched-234-Sat-FALD&oldid=18237"