Difference between revisions of "2.1.1.17-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7904 RXN-7904] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-coA synthetas...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.17-RXN 2.1.1.17-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7904 RXN-7904] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.17-RXN 2.1.1.17-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** long chain acyl-coA synthetase
 
−
** long chain acyl-CoA synthetase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/2.1.1.17 EC-2.1.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Long-Chain-Fatty-Acids]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Long-Chain-Acyl-CoAs]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[L-1-PHOSPHATIDYL-ETHANOLAMINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-405]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a long-chain fatty acid[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 a long-chain acyl-CoA[c] '''+''' 1 diphosphate[c]
+
** 1 an L-1-phosphatidylethanolamine[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 a phosphatidyl-N-methylethanolamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Ec-02_006430]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Ec-12_008720]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Ec-03_003710]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Ec-01_001560]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5143]], long-chain fatty acid activation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5143 PWY-5143]
+
* [[PWY-6825]], phosphatidylcholine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6825 PWY-6825]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6803]], phosphatidylcholine acyl editing: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6803 PWY-6803]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6873]], long chain fatty acid ester synthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6873 PWY-6873]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7033]], alkane biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7033 PWY-7033]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-5885]], wax esters biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5885 PWY-5885]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[gap-filling]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
* PIR:
+
* RHEA:
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A36275 A36275]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11164 11164]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A54901 A54901]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A70117 A70117]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B54901 B54901]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B75585 B75585]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C70762 C70762]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C71361 C71361]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C75364 C75364]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D69649 D69649]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D72605 D72605]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F86707 F86707]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G81798 G81798]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64041 H64041]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H69274 H69274]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H70173 H70173]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H81068 H81068]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JE0262 JE0262]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0202 JX0202]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0205 JX0205]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S23052 S23052]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S23467 S23467]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41589 S41589]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S49487 S49487]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S56060 S56060]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74984 S74984]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T01875 T01875]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T02834 T02834]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07928 T07928]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07929 T07929]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07944 T07944]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T08182 T08182]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T08904 T08904]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T34994 T34994]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T35430 T35430]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T35513 T35513]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T39766 T39766]
+
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00390 R00390]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02056 R02056]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O60135 O60135]
+
** [http://www.uniprot.org/uniprot/P05374 P05374]
−
** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
+
** [http://www.uniprot.org/uniprot/Q05197 Q05197]
−
** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
+
** [http://www.uniprot.org/uniprot/Q08388 Q08388]
−
** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
+
−
** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
+
−
** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
+
−
** [http://www.uniprot.org/uniprot/Q96338 Q96338]
+
−
** [http://www.uniprot.org/uniprot/Q96538 Q96538]
+
−
** [http://www.uniprot.org/uniprot/Q96537 Q96537]
+
−
** [http://www.uniprot.org/uniprot/O15840 O15840]
+
−
** [http://www.uniprot.org/uniprot/O81614 O81614]
+
−
** [http://www.uniprot.org/uniprot/P73004 P73004]
+
−
** [http://www.uniprot.org/uniprot/P47912 P47912]
+
−
** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
+
−
** [http://www.uniprot.org/uniprot/P69452 P69452]
+
−
** [http://www.uniprot.org/uniprot/P69451 P69451]
+
−
** [http://www.uniprot.org/uniprot/Q02602 Q02602]
+
−
** [http://www.uniprot.org/uniprot/P30624 P30624]
+
−
** [http://www.uniprot.org/uniprot/P33124 P33124]
+
−
** [http://www.uniprot.org/uniprot/P33121 P33121]
+
−
** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
+
−
** [http://www.uniprot.org/uniprot/O51539 O51539]
+
−
** [http://www.uniprot.org/uniprot/O30039 O30039]
+
−
** [http://www.uniprot.org/uniprot/P44446 P44446]
+
−
** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
+
−
** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
+
−
** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
+
−
** [http://www.uniprot.org/uniprot/P94547 P94547]
+
−
** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
+
−
** [http://www.uniprot.org/uniprot/O83181 O83181]
+
−
** [http://www.uniprot.org/uniprot/Q10776 Q10776]
+
−
** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
+
−
** [http://www.uniprot.org/uniprot/P39002 P39002]
+
−
** [http://www.uniprot.org/uniprot/O51162 O51162]
+
−
** [http://www.uniprot.org/uniprot/P39518 P39518]
+
−
** [http://www.uniprot.org/uniprot/P18163 P18163]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=long chain acyl-coA synthetase}}
+
{{#set: ec number=EC-2.1.1.17}}
−
{{#set: common name=long chain acyl-CoA synthetase}}
+
{{#set: in pathway=PWY-6825}}
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: gene associated=Ec-02_006430|Ec-12_008720|Ec-03_003710|Ec-01_001560}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: in pathway=PWY-5143|PWY-6803|PWY-6873|PWY-7033|PWY-5885}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:32, 21 March 2018

Reaction 2.1.1.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-6825, phosphatidylcholine biosynthesis V: PWY-6825
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=2.1.1.17-RXN&oldid=27562"