Difference between revisions of "2.5.1.39-RXN"

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(Created page with "Category:Gene == Gene Ec-25_002110 == * left end position: ** 2405422 * transcription direction: ** NEGATIVE * right end position: ** 2413496 * centisome position: ** 54.0...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.39-RXN 2.5.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxybenzoate non...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-25_002110 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.39-RXN 2.5.1.39-RXN] ==
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* left end position:
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* direction:
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** 2405422
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** 4-hydroxybenzoate nonaprenyltransferase
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* right end position:
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* ec number:
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** 2413496
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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* centisome position:
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** 54.043037   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0116_0004
 
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** Esi0116_0004
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[SOLANESYL-PYROPHOSPHATE]][c] '''=>''' 1 [[NONAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c]
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***automated-name-match
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* With common name(s):
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* [[GPPSYN-RXN]]
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** 1 4-hydroxybenzoate[c] '''+''' 1 all-trans-nonaprenyl diphosphate[c] '''=>''' 1 3-nonaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7736]]
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* Gene: [[Ec-00_007360]]
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* [[PWY-7410]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6859]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-7709]]
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== Pathways  ==
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* [[PWY-7102]]
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* [[PWY-5871]], ubiquinol-9 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5871 PWY-5871]
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* [[PWY-7182]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6708]]
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* [[PWY-5856]], ubiquinol-9 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5856 PWY-5856]
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* [[PWY-7659]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5123]]
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* [[PWY-6978]], plastoquinol-9 biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6978 PWY-6978]
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* [[PWY-5122]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6383]]
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== Reconstruction information  ==
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* [[PWY-7141]]
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* Category: [[annotation]]
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* [[PWY-5870]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2405422}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17709 17709]
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{{#set: right end position=2413496}}
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* LIGAND-RXN:
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{{#set: centisome position=54.043037    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R07273 R07273]
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{{#set: common name=Esi_0116_0004|Esi0116_0004}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN|GPPSYN-RXN}}
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{{#set: common name=4-hydroxybenzoate nonaprenyltransferase}}
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{{#set: pathway associated=PWY-7736|PWY-7410|PWY-6859|PWY-7709|PWY-7102|PWY-7182|PWY-6708|PWY-7659|PWY-5123|PWY-5122|PWY-6383|PWY-7141|PWY-5870}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: gene associated=Ec-00_007360}}
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{{#set: in pathway=PWY-5871|PWY-5856|PWY-6978}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:55, 21 March 2018

Reaction 2.5.1.39-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-hydroxybenzoate nonaprenyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5871, ubiquinol-9 biosynthesis (eukaryotic): PWY-5871
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-5856, ubiquinol-9 biosynthesis (prokaryotic): PWY-5856
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6978, plastoquinol-9 biosynthesis II: PWY-6978
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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