Difference between revisions of "2.7.7.8-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9222 RXN-9222] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxybenzoate nonaprenylt...")
(Created page with "Category:Gene == Gene Ec-21_002920 == * left end position: ** 3964445 * transcription direction: ** POSITIVE * right end position: ** 3978722 * centisome position: ** 53.7...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9222 RXN-9222] ==
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== Gene Ec-21_002920 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3964445
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* common name:
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* transcription direction:
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** 4-hydroxybenzoate nonaprenyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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** 3978722
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* centisome position:
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** 53.7179   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0387_0012
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** Esi0387_0012
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADPREDUCT-RXN]]
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** 1 [[ALL-TRANS-HEPTAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-9852]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 all-trans-heptaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 diphosphate[c] '''+''' 1 3-heptaprenyl-4-hydroxybenzoate[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[CDPREDUCT-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: go-term
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* [[Ec-00_007360]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[GDPREDUCT-RXN]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-esiliculosus_genome]]
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== Pathways  ==
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*** Assignment: go-term
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* [[PWY-5873]], ubiquinol-7 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5873 PWY-5873]
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** Source: [[orthology-aragem]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]]
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* [[PWY-5855]], ubiquinol-7 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5855 PWY-5855]
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** Source: [[annotation-esiliculosus_genome]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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*** Assignment: go-term
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== Reconstruction information  ==
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* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN0-722]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN0-747]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN0-748]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[UDPREDUCT-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PWY-7226]]
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* [[PWY-6545]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3964445}}
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{{#set: common name=4-hydroxybenzoate nonaprenyltransferase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: right end position=3978722}}
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{{#set: gene associated=Ec-00_007360}}
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{{#set: centisome position=53.7179    }}
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{{#set: in pathway=PWY-5873|PWY-5855}}
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{{#set: common name=Esi_0387_0012|Esi0387_0012}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=ADPREDUCT-RXN|CDPREDUCT-RXN|GDPREDUCT-RXN|RIBONUCLEOSIDE-DIP-REDUCTI-RXN|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|RXN0-722|RXN0-747|RXN0-748|UDPREDUCT-RXN}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7220|PWY-7184|PWY-7222|PWY0-166|PWY-7227|PWY-7226|PWY-6545}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:55, 21 March 2018

Gene Ec-21_002920

  • left end position:
    • 3964445
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3978722
  • centisome position:
    • 53.7179
  • Synonym(s):
    • Esi_0387_0012
    • Esi0387_0012

Reactions associated

Pathways associated

External links

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