Difference between revisions of "3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3,4-saturated f...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] == * direction: ** REVER...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 2,3,4-saturated fatty acyl-CoA synthetase
+
** 3-methyl-2-oxobutanoate hydroxymethyltransferase
−
** long chain acyl-coA synthetase
+
−
** long chain acyl-CoA synthetase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
 
* Synonym(s):
 
* Synonym(s):
−
** Acyl-activating enzyme
 
−
** Fatty acid thiokinase (long-chain)
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[CPD66-39]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''<=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[2-DEHYDROPANTOATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 a 2,3,4-saturated fatty acid[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c]
+
** 1 H2O[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''<=>''' 1 a tetrahydrofolate[c] '''+''' 1 2-dehydropantoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-12_008720]]
+
* Gene: [[Ec-01_001700]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
−
* [[Ec-01_001560]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-02_006430]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-03_003710]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5136]], fatty acid &beta;-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
+
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7288]], fatty acid &beta;-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
−
* [[FAO-PWY]], fatty acid &beta;-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY66-391]], fatty acid &beta;-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
+
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 47: Line 28:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11824 11824]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P18163 P18163]
+
** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1]
−
** [http://www.uniprot.org/uniprot/P39518 P39518]
+
** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0]
−
** [http://www.uniprot.org/uniprot/O51162 O51162]
+
** [http://www.uniprot.org/uniprot/P31057 P31057]
−
** [http://www.uniprot.org/uniprot/P39002 P39002]
+
** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1]
−
** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
+
** [http://www.uniprot.org/uniprot/P38122 P38122]
−
** [http://www.uniprot.org/uniprot/Q10776 Q10776]
+
** [http://www.uniprot.org/uniprot/Q09672 Q09672]
−
** [http://www.uniprot.org/uniprot/O83181 O83181]
+
** [http://www.uniprot.org/uniprot/P52997 P52997]
−
** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
+
** [http://www.uniprot.org/uniprot/Q9X712 Q9X712]
−
** [http://www.uniprot.org/uniprot/P94547 P94547]
+
** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6]
−
** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
+
** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2]
−
** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
+
** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2]
−
** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
+
** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2]
−
** [http://www.uniprot.org/uniprot/P44446 P44446]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/O30039 O30039]
+
{{#set: common name=3-methyl-2-oxobutanoate hydroxymethyltransferase}}
−
** [http://www.uniprot.org/uniprot/O51539 O51539]
+
{{#set: ec number=EC-2.1.2.11}}
−
** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
+
{{#set: gene associated=Ec-01_001700}}
−
** [http://www.uniprot.org/uniprot/P33121 P33121]
+
{{#set: in pathway=PANTO-PWY}}
−
** [http://www.uniprot.org/uniprot/P33124 P33124]
+
−
** [http://www.uniprot.org/uniprot/P30624 P30624]
+
−
** [http://www.uniprot.org/uniprot/Q02602 Q02602]
+
−
** [http://www.uniprot.org/uniprot/P69451 P69451]
+
−
** [http://www.uniprot.org/uniprot/P69452 P69452]
+
−
** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
+
−
** [http://www.uniprot.org/uniprot/P47912 P47912]
+
−
** [http://www.uniprot.org/uniprot/P73004 P73004]
+
−
** [http://www.uniprot.org/uniprot/O81614 O81614]
+
−
** [http://www.uniprot.org/uniprot/O15840 O15840]
+
−
** [http://www.uniprot.org/uniprot/Q96537 Q96537]
+
−
** [http://www.uniprot.org/uniprot/Q96538 Q96538]
+
−
** [http://www.uniprot.org/uniprot/Q96338 Q96338]
+
−
** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
+
−
** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
+
−
** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
+
−
** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
+
−
** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
+
−
** [http://www.uniprot.org/uniprot/O60135 O60135]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=2,3,4-saturated fatty acyl-CoA synthetase}}
+
−
{{#set: common name=long chain acyl-coA synthetase}}
+
−
{{#set: common name=long chain acyl-CoA synthetase}}
+
−
{{#set: ec number=EC-6.2.1.3}}
+
−
{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
+
−
{{#set: gene associated=Ec-12_008720|Ec-01_001560|Ec-02_006430|Ec-03_003710}}
+
−
{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:06, 21 March 2018

Reaction 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-methyl-2-oxobutanoate hydroxymethyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PANTO-PWY, phosphopantothenate biosynthesis I: PANTO-PWY
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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