Difference between revisions of "3.1.26.4-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE PREPHENATE] == * smiles: ** C(=O)([O-])C(=O)CC1(C(=O)[O-])(C=CC(O)C=C1) * inchi key:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA-DNA hybrid ribonu...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE PREPHENATE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] ==
−
* smiles:
+
* direction:
−
** C(=O)([O-])C(=O)CC1(C(=O)[O-])(C=CC(O)C=C1)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=FPWMCUPFBRFMLH-XGAOUMNUSA-L
+
 
* common name:
 
* common name:
−
** prephenate
+
** RNA-DNA hybrid ribonuclease
−
* molecular weight:
+
* ec number:
−
** 224.17   
+
** [http://enzyme.expasy.org/EC/3.1.26.4 EC-3.1.26.4]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[PREPHENATEDEHYDROG-RXN]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** n [[WATER]][c] '''+''' 1 [[RNA-DNA-hybrids]][c] '''=>''' 1 [[DNA-Holder]][c] '''+''' n [[Nucleoside-Monophosphates]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
−
* [[PREPHENATE-TRANSAMINE-RXN]]
+
** n H2O[c] '''+''' 1 a RNA-DNA hybrid[c] '''=>''' 1 DNA[c] '''+''' n a nucleoside 5'-monophosphate[c]
−
* [[PREPHENATEDEHYDRAT-RXN]]
+
 
−
* [[PREPHENATE-DEHYDROGENASE-NADP+-RXN]]
+
== Genes associated with this reaction  ==
−
* [[PREPHENATE-ASP-TRANSAMINE-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHORISMATEMUT-RXN]]
+
* Gene: [[Ec-25_002560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-17_003740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-22_003570]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 126-49-8
+
* UNIPROT:
−
* PUBCHEM:
+
** [http://www.uniprot.org/uniprot/P52975 P52975]
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460303 5460303]
+
** [http://www.uniprot.org/uniprot/Q9CDG3 Q9CDG3]
−
* HMDB : HMDB12283
+
** [http://www.uniprot.org/uniprot/Q9PM39 Q9PM39]
−
* LIGAND-CPD:
+
** [http://www.uniprot.org/uniprot/Q9JX40 Q9JX40]
−
** [http://www.genome.jp/dbget-bin/www_bget?C00254 C00254]
+
** [http://www.uniprot.org/uniprot/P43807 P43807]
−
* CHEMSPIDER:
+
** [http://www.uniprot.org/uniprot/P43808 P43808]
−
** [http://www.chemspider.com/Chemical-Structure.4573884.html 4573884]
+
** [http://www.uniprot.org/uniprot/Q9PJA1 Q9PJA1]
−
* CHEBI:
+
** [http://www.uniprot.org/uniprot/Q9CG17 Q9CG17]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29934 29934]
+
** [http://www.uniprot.org/uniprot/Q9JTD9 Q9JTD9]
−
* BIGG : 34406
+
** [http://www.uniprot.org/uniprot/Q57599 Q57599]
−
{{#set: smiles=C(=O)([O-])C(=O)CC1(C(=O)[O-])(C=CC(O)C=C1)}}
+
** [http://www.uniprot.org/uniprot/O44114 O44114]
−
{{#set: inchi key=InChIKey=FPWMCUPFBRFMLH-XGAOUMNUSA-L}}
+
** [http://www.uniprot.org/uniprot/P0A7Y4 P0A7Y4]
−
{{#set: common name=prephenate}}
+
** [http://www.uniprot.org/uniprot/P10442 P10442]
−
{{#set: molecular weight=224.17    }}
+
** [http://www.uniprot.org/uniprot/P13319 P13319]
−
{{#set: consumed by=PREPHENATEDEHYDROG-RXN}}
+
** [http://www.uniprot.org/uniprot/Q7LYY8 Q7LYY8]
−
{{#set: consumed or produced by=PREPHENATE-TRANSAMINE-RXN|PREPHENATEDEHYDRAT-RXN|PREPHENATE-DEHYDROGENASE-NADP+-RXN|PREPHENATE-ASP-TRANSAMINE-RXN|CHORISMATEMUT-RXN}}
+
** [http://www.uniprot.org/uniprot/P0A2B9 P0A2B9]
 +
** [http://www.uniprot.org/uniprot/Q04740 Q04740]
 +
** [http://www.uniprot.org/uniprot/Q49050 Q49050]
 +
** [http://www.uniprot.org/uniprot/O69014 O69014]
 +
** [http://www.uniprot.org/uniprot/Q54222 Q54222]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=RNA-DNA hybrid ribonuclease}}
 +
{{#set: ec number=EC-3.1.26.4}}
 +
{{#set: gene associated=Ec-25_002560|Ec-17_003740|Ec-22_003570}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:05, 21 March 2018

Reaction 3.1.26.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RNA-DNA hybrid ribonuclease
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=3.1.26.4-RXN&oldid=24449"