Difference between revisions of "3.1.4.17-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7312 PWY-7312] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-543 TAX-543...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA ligase/cyclic nuc...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7312 PWY-7312] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-543 TAX-543]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dTDP-D-β-fucofuranose biosynthesis
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** RNA ligase/cyclic nucleotide phosphodiesterase
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** 3',5'-cyclic-nucleotide phosphodiesterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.4.17 EC-3.1.4.17]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[DTDPGLUCDEHYDRAT-RXN]]
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** 1 [[Cyclic-3-5-Nucleoside-Monophosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Nucleoside-Monophosphates]][c] '''+''' 1 [[PROTON]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Ec-27_005770]]
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** 1 a nucleoside cyclic 3',5'-monophosphate[c] '''+''' 1 H2O[c] '''=>''' 1 a nucleoside 5'-monophosphate[c] '''+''' 1 H+[c]
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*** [[Ec-01_007350]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* Gene: [[Ec-14_005050]]
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== Reaction(s) not found ==
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN]
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*** Assignment: GO-TERM
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14532 RXN-14532]
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* Gene: [[Ec-20_000300]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14533 RXN-14533]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-01_000990]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-20_002540]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
 +
== Pathways  ==
 +
== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-543}}
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* RHEA:
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{{#set: common name=dTDP-D-β-fucofuranose biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14653 14653]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: total reaction=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03259 R03259]
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{{#set: completion rate=25.0}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P12019 P12019]
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** [http://www.uniprot.org/uniprot/Q56686 Q56686]
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** [http://www.uniprot.org/uniprot/P14099 P14099]
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** [http://www.uniprot.org/uniprot/Q01066 Q01066]
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** [http://www.uniprot.org/uniprot/Q01061 Q01061]
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** [http://www.uniprot.org/uniprot/P14100 P14100]
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** [http://www.uniprot.org/uniprot/Q01065 Q01065]
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** [http://www.uniprot.org/uniprot/P27815 P27815]
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** [http://www.uniprot.org/uniprot/O66909 O66909]
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** [http://www.uniprot.org/uniprot/P14270 P14270]
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** [http://www.uniprot.org/uniprot/O27755 O27755]
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** [http://www.uniprot.org/uniprot/P44685 P44685]
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** [http://www.uniprot.org/uniprot/P22434 P22434]
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** [http://www.uniprot.org/uniprot/P0AEW4 P0AEW4]
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** [http://www.uniprot.org/uniprot/O26280 O26280]
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** [http://www.uniprot.org/uniprot/O06629 O06629]
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** [http://www.uniprot.org/uniprot/O30241 O30241]
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** [http://www.uniprot.org/uniprot/P14644 P14644]
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** [http://www.uniprot.org/uniprot/P54748 P54748]
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** [http://www.uniprot.org/uniprot/Q13945 Q13945]
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** [http://www.uniprot.org/uniprot/Q01062 Q01062]
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** [http://www.uniprot.org/uniprot/P54827 P54827]
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** [http://www.uniprot.org/uniprot/Q01064 Q01064]
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** [http://www.uniprot.org/uniprot/Q9NP56 Q9NP56]
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** [http://www.uniprot.org/uniprot/O60658 O60658]
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** [http://www.uniprot.org/uniprot/P36599 P36599]
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** [http://www.uniprot.org/uniprot/P30645 P30645]
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** [http://www.uniprot.org/uniprot/Q45859 Q45859]
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** [http://www.uniprot.org/uniprot/P12252 P12252]
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** [http://www.uniprot.org/uniprot/P06776 P06776]
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** [http://www.uniprot.org/uniprot/Q08493 Q08493]
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** [http://www.uniprot.org/uniprot/Q63421 Q63421]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=RNA ligase/cyclic nucleotide phosphodiesterase}}
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{{#set: common name=3',5'-cyclic-nucleotide phosphodiesterase}}
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{{#set: ec number=EC-3.1.4.17}}
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{{#set: gene associated=Ec-14_005050|Ec-20_000300|Ec-01_000990|Ec-20_002540}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:08, 21 March 2018

Reaction 3.1.4.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RNA ligase/cyclic nucleotide phosphodiesterase
    • 3',5'-cyclic-nucleotide phosphodiesterase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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