Difference between revisions of "Ec-25 003070"

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(Created page with "Category:Gene == Gene Ec-15_000820 == * left end position: ** 1075184 * transcription direction: ** POSITIVE * right end position: ** 1083424 * centisome position: ** 19.9...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.8-RXN 3.2.1.8-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Endo-1,4-beta-xylanase,...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-15_000820 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.8-RXN 3.2.1.8-RXN] ==
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* left end position:
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* direction:
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** 1075184
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Endo-1,4-beta-xylanase, family GH10
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* right end position:
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* ec number:
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** 1083424
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** [http://enzyme.expasy.org/EC/3.2.1.8 EC-3.2.1.8]
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* centisome position:
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−
** 19.91726   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0012_0032
 
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** Esi0012_0032
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[5-NUCLEOTID-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[1-4-beta-Xylan]][c] '''+''' n [[WATER]][c] '''=>''' n [[1-4-D-xylooligosaccharides]][c]
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***go-term
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* With common name(s):
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* [[AMP-DEPHOSPHORYLATION-RXN]]
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** 1 a (1→4)-β-D-xylan[c] '''+''' n H2O[c] '''=>''' n a (1->4)-β-D-xylan oligosaccharide[c]
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** esiliculosus_genome
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−
***go-term
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== Genes associated with this reaction  ==
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* [[RXN-14025]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* [[Ec-07_005310]]
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***go-term
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** ESILICULOSUS_GENOME
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* [[RXN-14026]]
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***EC-NUMBER
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** esiliculosus_genome
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== Pathways ==
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***go-term
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* [[PWY-6784]], cellulose and hemicellulose degradation (cellulolosome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6784 PWY-6784]
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* [[RXN-14227]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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** esiliculosus_genome
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== Reconstruction information  ==
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***go-term
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* Category: [[annotation]]
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* [[RXN-5841]]
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** Source: [[annotation-esiliculosus_genome]]
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** esiliculosus_genome
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*** Tool: [[pathwaytools]]
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***go-term
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−
* [[RXN-7607]]
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−
** esiliculosus_genome
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−
***go-term
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−
* [[RXN-7609]]
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−
** esiliculosus_genome
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−
***go-term
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−
* [[XMPXAN-RXN]]
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−
** esiliculosus_genome
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−
***go-term
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−
== Pathways associated ==
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−
* [[PWY-5381]]
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−
* [[NAD-BIOSYNTHESIS-II]]
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−
* [[PWY-7185]]
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−
* [[SALVADEHYPOX-PWY]]
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−
* [[PWY-6596]]
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−
* [[PWY-6607]]
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−
* [[PWY-6606]]
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−
* [[PWY-6608]]
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−
* [[PWY-5695]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=1075184}}
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* UNIPROT:
−
{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P10478 P10478]
−
{{#set: right end position=1083424}}
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** [http://www.uniprot.org/uniprot/Q9R5M7 Q9R5M7]
−
{{#set: centisome position=19.91726    }}
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** [http://www.uniprot.org/uniprot/Q7M519 Q7M519]
−
{{#set: common name=Esi_0012_0032|Esi0012_0032}}
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** [http://www.uniprot.org/uniprot/Q7M520 Q7M520]
−
{{#set: reaction associated=5-NUCLEOTID-RXN|AMP-DEPHOSPHORYLATION-RXN|RXN-14025|RXN-14026|RXN-14227|RXN-5841|RXN-7607|RXN-7609|XMPXAN-RXN}}
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** [http://www.uniprot.org/uniprot/P35809 P35809]
−
{{#set: pathway associated=PWY-5381|NAD-BIOSYNTHESIS-II|PWY-7185|SALVADEHYPOX-PWY|PWY-6596|PWY-6607|PWY-6606|PWY-6608|PWY-5695}}
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** [http://www.uniprot.org/uniprot/Q7M513 Q7M513]
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** [http://www.uniprot.org/uniprot/Q7M0W8 Q7M0W8]
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** [http://www.uniprot.org/uniprot/P23556 P23556]
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** [http://www.uniprot.org/uniprot/Q7M4V8 Q7M4V8]
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** [http://www.uniprot.org/uniprot/Q9R5M6 Q9R5M6]
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** [http://www.uniprot.org/uniprot/Q7M0X0 Q7M0X0]
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** [http://www.uniprot.org/uniprot/Q7M0W9 Q7M0W9]
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** [http://www.uniprot.org/uniprot/P45703 P45703]
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** [http://www.uniprot.org/uniprot/P18429 P18429]
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** [http://www.uniprot.org/uniprot/P40943 P40943]
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** [http://www.uniprot.org/uniprot/P54865 P54865]
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** [http://www.uniprot.org/uniprot/Q00177 Q00177]
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** [http://www.uniprot.org/uniprot/P79046 P79046]
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** [http://www.uniprot.org/uniprot/O83007 O83007]
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** [http://www.uniprot.org/uniprot/Q9UUQ2 Q9UUQ2]
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** [http://www.uniprot.org/uniprot/Q9HFA4 Q9HFA4]
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** [http://www.uniprot.org/uniprot/Q9F1V3 Q9F1V3]
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** [http://www.uniprot.org/uniprot/Q9AJR9 Q9AJR9]
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** [http://www.uniprot.org/uniprot/P29417 P29417]
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** [http://www.uniprot.org/uniprot/P26514 P26514]
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** [http://www.uniprot.org/uniprot/P26220 P26220]
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** [http://www.uniprot.org/uniprot/Q9R5P8 Q9R5P8]
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** [http://www.uniprot.org/uniprot/Q9R5P9 Q9R5P9]
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** [http://www.uniprot.org/uniprot/P09850 P09850]
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** [http://www.uniprot.org/uniprot/P14768 P14768]
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** [http://www.uniprot.org/uniprot/P45796 P45796]
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** [http://www.uniprot.org/uniprot/P29126 P29126]
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** [http://www.uniprot.org/uniprot/P29127 P29127]
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** [http://www.uniprot.org/uniprot/Q02244 Q02244]
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** [http://www.uniprot.org/uniprot/P40944 P40944]
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** [http://www.uniprot.org/uniprot/P55334 P55334]
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** [http://www.uniprot.org/uniprot/Q56013 Q56013]
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** [http://www.uniprot.org/uniprot/Q59256 Q59256]
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** [http://www.uniprot.org/uniprot/P55328 P55328]
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** [http://www.uniprot.org/uniprot/Q01426 Q01426]
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** [http://www.uniprot.org/uniprot/P55331 P55331]
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** [http://www.uniprot.org/uniprot/Q59257 Q59257]
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** [http://www.uniprot.org/uniprot/P51584 P51584]
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** [http://www.uniprot.org/uniprot/P49942 P49942]
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** [http://www.uniprot.org/uniprot/P55333 P55333]
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** [http://www.uniprot.org/uniprot/P55332 P55332]
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** [http://www.uniprot.org/uniprot/Q59790 Q59790]
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** [http://www.uniprot.org/uniprot/Q59300 Q59300]
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** [http://www.uniprot.org/uniprot/Q59301 Q59301]
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** [http://www.uniprot.org/uniprot/Q59674 Q59674]
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** [http://www.uniprot.org/uniprot/Q59675 Q59675]
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** [http://www.uniprot.org/uniprot/Q60037 Q60037]
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** [http://www.uniprot.org/uniprot/Q12579 Q12579]
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** [http://www.uniprot.org/uniprot/Q12580 Q12580]
 +
** [http://www.uniprot.org/uniprot/Q60046 Q60046]
 +
** [http://www.uniprot.org/uniprot/P93185 P93185]
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** [http://www.uniprot.org/uniprot/P93186 P93186]
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** [http://www.uniprot.org/uniprot/P93187 P93187]
 +
** [http://www.uniprot.org/uniprot/Q12603 Q12603]
 +
** [http://www.uniprot.org/uniprot/O69230 O69230]
 +
** [http://www.uniprot.org/uniprot/O30426 O30426]
 +
** [http://www.uniprot.org/uniprot/O52373 O52373]
 +
** [http://www.uniprot.org/uniprot/Q59278 Q59278]
 +
** [http://www.uniprot.org/uniprot/Q9RKN6 Q9RKN6]
 +
** [http://www.uniprot.org/uniprot/P00694 P00694]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Endo-1,4-beta-xylanase, family GH10}}
 +
{{#set: ec number=EC-3.2.1.8}}
 +
{{#set: gene associated=Ec-07_005310}}
 +
{{#set: in pathway=PWY-6784}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 21:45, 17 March 2018

Reaction 3.2.1.8-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Endo-1,4-beta-xylanase, family GH10
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6784, cellulose and hemicellulose degradation (cellulolosome): PWY-6784
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-25_003070&oldid=10198"