Difference between revisions of "3.4.21.89-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8975 RXN-8975] == * direction: ** REVERSIBLE * common name: ** phospho-N-acetylmuramoyl-pentape...")
(Created page with "Category:Gene == Gene Ec-27_000390 == * left end position: ** 271653 * transcription direction: ** POSITIVE * right end position: ** 278407 * centisome position: ** 4.2117...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8975 RXN-8975] ==
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== Gene Ec-27_000390 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 271653
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* common name:
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* transcription direction:
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** phospho-N-acetylmuramoyl-pentapeptide-transferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.8.13 EC-2.7.8.13]
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** 278407
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* centisome position:
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** 4.211735   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0122_0054
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** Esi0122_0054
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** mGST
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GSHTRAN-RXN]]
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** 1 [[CPD-9646]][c] '''+''' 1 [[C3]][c] '''<=>''' 1 [[C4]][c] '''+''' 1 [[UMP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 di-trans,octa-cis-undecaprenyl phosphate[c] '''+''' 1 UDP-N-acetyl-&alpha;-D-muramoyl-L-alanyl-&gamma;-D-glutamyl-L-lysyl-D-alanyl-D-alanine[c] '''<=>''' 1 undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-&gamma;-D-glutamyl-L-lysyl- D-alanyl-D-alanine[c] '''+''' 1 UMP[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[GST-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Ec-07_007020]]
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* Reaction: [[RXN-13673]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***GO-TERM
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-15680]]
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* [[PWY-6471]], peptidoglycan biosynthesis IV (Enterococcus faecium): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6471 PWY-6471]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5265]], peptidoglycan biosynthesis II (staphylococci): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5265 PWY-5265]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7112]]
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* [[PWY-6842]]
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* [[PWY-4061]]
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* [[PWY-7533]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=271653}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21920 21920]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=278407}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05629 R05629]
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{{#set: centisome position=4.211735    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Esi_0122_0054|Esi0122_0054|mGST}}
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{{#set: common name=phospho-N-acetylmuramoyl-pentapeptide-transferase}}
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{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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{{#set: ec number=EC-2.7.8.13}}
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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{{#set: gene associated=Ec-07_007020}}
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{{#set: in pathway=PWY-6471|PWY-5265}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:53, 21 March 2018

Gene Ec-27_000390

  • left end position:
    • 271653
  • transcription direction:
    • POSITIVE
  • right end position:
    • 278407
  • centisome position:
    • 4.211735
  • Synonym(s):
    • Esi_0122_0054
    • Esi0122_0054
    • mGST

Reactions associated

Pathways associated

External links

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