Difference between revisions of "4-CYTIDINE-5-DIPHOSPHO-2-C"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11474 RXN-11474] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-glutaryl-[acp] methyl...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-CYTIDINE-5-DIPHOSPHO-2-C 4-CYTIDINE-5-DIPHOSPHO-2-C] == * smiles: ** CC(O)(CO)C(O)COP(OP([O-]...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11474 RXN-11474] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-CYTIDINE-5-DIPHOSPHO-2-C 4-CYTIDINE-5-DIPHOSPHO-2-C] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(O)C(O)C(N1(C=CC(N)=NC(=O)1))O2))([O-])=O
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* inchi key:
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** InChIKey=YFAUKWZNPVBCFF-XHIBXCGHSA-L
 
* common name:
 
* common name:
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** 3-oxo-glutaryl-[acp] methyl ester synthase
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** 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
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** Thiolase-like, subgroup
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* molecular weight:
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** Beta-ketoacyl synthase, N-terminal
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** 519.295   
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** beta-ketoacyl synthase, partial
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** CDP-ME
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** CDP-methyl-D-erythritol
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** 4-diphosphocytidyl-2C-methyl-D-erythritol
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** 4-diphosphocytidyl-2-C-methylerythritol
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[2.7.1.148-RXN]]
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** 1 [[Malonyl-acp-methyl-ester]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[3-Ketoglutaryl-ACP-methyl-ester]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[2.7.7.60-RXN]]
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** 1 a malonyl-[acp] methyl ester[c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-glutaryl-[acp] methyl ester[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-27_002090]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-12_000650]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-27_003480]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-12_000640]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=3-oxo-glutaryl-[acp] methyl ester synthase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=24970669 24970669]
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{{#set: common name=Thiolase-like, subgroup}}
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* CHEBI:
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57823 57823]
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{{#set: common name=beta-ketoacyl synthase, partial}}
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* BIGG : 216317
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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* LIGAND-CPD:
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{{#set: ec number=EC-2.3.1.41}}
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** [http://www.genome.jp/dbget-bin/www_bget?C11435 C11435]
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{{#set: gene associated=Ec-27_002090|Ec-12_000650|Ec-27_003480|Ec-12_000640}}
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{{#set: smiles=CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(O)C(O)C(N1(C=CC(N)=NC(=O)1))O2))([O-])=O}}
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{{#set: in pathway=PWY-6519}}
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{{#set: inchi key=InChIKey=YFAUKWZNPVBCFF-XHIBXCGHSA-L}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=519.295    }}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: common name=CDP-ME|CDP-methyl-D-erythritol|4-diphosphocytidyl-2C-methyl-D-erythritol|4-diphosphocytidyl-2-C-methylerythritol}}
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{{#set: consumed by=2.7.1.148-RXN}}
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{{#set: produced by=2.7.7.60-RXN}}

Latest revision as of 20:53, 21 March 2018

Metabolite 4-CYTIDINE-5-DIPHOSPHO-2-C

  • smiles:
    • CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(O)C(O)C(N1(C=CC(N)=NC(=O)1))O2))([O-])=O
  • inchi key:
    • InChIKey=YFAUKWZNPVBCFF-XHIBXCGHSA-L
  • common name:
    • 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
  • molecular weight:
    • 519.295
  • Synonym(s):
    • CDP-ME
    • CDP-methyl-D-erythritol
    • 4-diphosphocytidyl-2C-methyl-D-erythritol
    • 4-diphosphocytidyl-2-C-methylerythritol

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(O)C(O)C(N1(C=CC(N)=NC(=O)1))O2))([O-])=O" cannot be used as a page name in this wiki.




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