Difference between revisions of "4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN] == * direction: ** LEFT-TO-R...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** GHMP kinase, C-terminal domain
 
 
* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.33 EC-4.1.1.33]
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** [http://enzyme.expasy.org/EC/4.1.2.52 EC-4.1.2.52]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[CPD-641]][c] '''=>''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ADP]][c]
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** 1 [[CPD-804]][c] '''=>''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[PYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
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** 1 ATP[c] '''+''' 1 (R)-mevalonate diphosphate[c] '''=>''' 1 isopentenyl diphosphate[c] '''+''' 1 phosphate[c] '''+''' 1 CO2[c] '''+''' 1 ADP[c]
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** 1 (4S)-4-hydroxy-2-oxoheptanedioate[c] '''=>''' 1 succinate semialdehyde[c] '''+''' 1 pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-21_001440]]
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* Gene: [[Ec-11_002460]]
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** ESILICULOSUS_GENOME
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** Source: [[orthology-aragem]]
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***EC-NUMBER
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−
** [[pantograph]]-[[aragem]]
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== Pathways  ==
 
== Pathways  ==
−
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
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−
** '''7''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23732 23732]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01121 R01121]
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** [http://www.genome.jp/dbget-bin/www_bget?R01647 R01647]
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?R01645 R01645]
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** [http://www.uniprot.org/uniprot/P32377 P32377]
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** [http://www.uniprot.org/uniprot/Q9U2A1 Q9U2A1]
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** [http://www.uniprot.org/uniprot/Q9U294 Q9U294]
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−
** [http://www.uniprot.org/uniprot/O13963 O13963]
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−
** [http://www.uniprot.org/uniprot/Q9M381 Q9M381]
+
−
** [http://www.uniprot.org/uniprot/O23722 O23722]
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{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=GHMP kinase, C-terminal domain}}
+
{{#set: ec number=EC-4.1.2.52}}
−
{{#set: ec number=EC-4.1.1.33}}
+
{{#set: gene associated=Ec-11_002460}}
−
{{#set: gene associated=Ec-21_001440}}
+
{{#set: in pathway=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY}}
−
{{#set: in pathway=PWY-922|PWY-7391}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-aragem}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:47, 21 March 2018

Reaction 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (4S)-4-hydroxy-2-oxoheptanedioate[c] => 1 succinate semialdehyde[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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