Difference between revisions of "4-IMIDAZOLEACETATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] == * direction: ** LEFT-TO-RIGHT *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** retinyl-palmitate esterase
+
** Acetyl-CoA carboxylase, partial
−
** Phospholipase/carboxylesterase/thioesterase
+
** acetyl-CoA carboxylase
−
** carboxylic ester hydrolase
+
−
** Carboxylesterase, type B
+
−
** putative serine esterase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
+
** [http://enzyme.expasy.org/EC/6.4.1.2 EC-6.4.1.2]
 
* Synonym(s):
 
* Synonym(s):
−
** retinyl palmitate hydrolase
 
−
** retinyl palmitate hydrolyase
 
−
** retinyl ester hydrolase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CHOCOLA_A]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[Retinols]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 all-trans-retinyl palmitate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 palmitate[c] '''+''' 1 a retinol[c]
+
** 1 ATP[c] '''+''' 1 hydrogen carbonate[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 malonyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-19_001900]]
+
* Gene: [[Ec-19_003040]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
−
* [[Ec-25_000250]]
+
* Gene: [[Ec-03_001890]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***GO-TERM
+
** Source: [[orthology-aragem]]
−
* [[Ec-16_002070]]
+
* Gene: [[Ec-14_002460]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-aragem]]
−
* [[Ec-27_004830]]
+
* Gene: [[Ec-01_009720]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-aragem]]
−
* [[Ec-12_006850]]
+
* Gene: [[Ec-01_010970]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_003230]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-20_002520]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
 +
** '''6''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
 +
** '''3''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6722]], candicidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6722 PWY-6722]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6679]], jadomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6679 PWY-6679]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21508 21508]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11308 11308]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00742 R00742]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=retinyl-palmitate esterase}}
+
{{#set: common name=Acetyl-CoA carboxylase, partial}}
−
{{#set: common name=Phospholipase/carboxylesterase/thioesterase}}
+
{{#set: common name=acetyl-CoA carboxylase}}
−
{{#set: common name=carboxylic ester hydrolase}}
+
{{#set: ec number=EC-6.4.1.2}}
−
{{#set: common name=Carboxylesterase, type B}}
+
{{#set: gene associated=Ec-19_003040|Ec-03_001890|Ec-14_002460|Ec-01_009720|Ec-01_010970|Ec-19_003230|Ec-20_002520}}
−
{{#set: common name=putative serine esterase}}
+
{{#set: in pathway=PWY-7388|PWY-5789|PWY-5743|PWY-5744|PWY-6722|PWY-6679|PWY-4381}}
−
{{#set: ec number=EC-3.1.1.1}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: common name=retinyl palmitate hydrolase|retinyl palmitate hydrolyase|retinyl ester hydrolase}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: gene associated=Ec-19_001900|Ec-25_000250|Ec-16_002070|Ec-27_004830|Ec-12_006850}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 14:18, 21 March 2018

Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acetyl-CoA carboxylase, partial
    • acetyl-CoA carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 hydrogen carbonate[c] + 1 acetyl-CoA[c] => 1 phosphate[c] + 1 ADP[c] + 1 H+[c] + 1 malonyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
    • 6 reactions found over 16 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-5744, glyoxylate assimilation: PWY-5744
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-6722, candicidin biosynthesis: PWY-6722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6679, jadomycin biosynthesis: PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-4381, fatty acid biosynthesis initiation I: PWY-4381
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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