Difference between revisions of "6.3.4.11-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7440 PWY-7440] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2037 TAX-20...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.11-RXN 6.3.4.11-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Biotin/lipoate A/B pr...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7440 PWY-7440] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.11-RXN 6.3.4.11-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2037 TAX-2037]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** dTDP-β-L-4-epi-vancosamine biosynthesis
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** Biotin/lipoate A/B protein ligase
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** Biotin/lipoate A/B protein ligase family
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.4.11 EC-6.3.4.11]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[DTDPGLUCDEHYDRAT-RXN]]
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** 1 [[Apo-3-methylcrotonoyl-CoA-carbon-dioxide]][c] '''+''' 1 [[BIOTIN]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[3-methylcrotonoyl-CoA-carbon-dioxide]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Ec-27_005770]]
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** 1 an apo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''+''' 1 biotin[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 a holo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)][c]
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*** [[Ec-01_007350]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* Gene: [[Ec-05_005190]]
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== Reaction(s) not found ==
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12404 RXN-12404]
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* Gene: [[Ec-00_003530]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12943 RXN-12943]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15225 RXN-15225]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15226 RXN-15226]
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* Gene: [[Ec-01_008620]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15227 RXN-15227]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15233 RXN-15233]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-11_004970]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2037}}
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* LIGAND-RXN:
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{{#set: common name=dTDP-β-L-4-epi-vancosamine biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04604 R04604]
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{{#set: reaction found=1}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=8}}
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{{#set: common name=Biotin/lipoate A/B protein ligase}}
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{{#set: completion rate=13.0}}
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{{#set: common name=Biotin/lipoate A/B protein ligase family}}
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{{#set: ec number=EC-6.3.4.11}}
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{{#set: gene associated=Ec-05_005190|Ec-00_003530|Ec-01_008620|Ec-11_004970}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:24, 21 March 2018

Reaction 6.3.4.11-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Biotin/lipoate A/B protein ligase
    • Biotin/lipoate A/B protein ligase family
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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